RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SLAQ13239 276 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 Q6ZS49 121 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 LSM4Q9Y4Z0 139 aaKnown RBP5.1□□□□□ -1.59
PTPN3-202ENST00000374541 S4R3C0 116 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 ATMQ13315 3056 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 M0R1W7 72 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 C1QCP02747 245 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 NMSQ5H8A3 153 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 NUP35Q8NFH5 326 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 CSTL1Q9H114 145 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 FAM215AQ9Y5M1 114 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 OBSL1O75147 1896 aa5.1□□□□□ -1.59
PTPN3-202ENST00000374541 A0A087X0K7 114 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 IGHV2-70DA0A0C4DH43 119 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 LINC01619G3V211 115 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 K7EP34 96 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 CCL3L1P16619 93 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 SUPT4H1P63272 117 aaKnown RBP5.09□□□□□ -1.59
PTPN3-202ENST00000374541 TCTEX1D4Q5JR98 221 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 LYL1P12980 280 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 SRSF2Q01130 221 aaKnown RBP5.09□□□□□ -1.59
PTPN3-202ENST00000374541 PYY3Q5JQD4 70 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 Q86TA4 180 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 C15orf53Q8NAA6 179 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 C10orf105Q8TEF2 133 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 SMR3AQ99954 134 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 PKIGQ9Y2B9 76 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 BSNQ9UPA5 3926 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 ACYP1P07311 99 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 VPREB3Q9UKI3 123 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 MYLKQ15746 1914 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 IGHV3-64A0A075B6Q5 118 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 hDV102S1A0JD36 115 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 NCR2O95944 276 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 IGHG4P01861 327 aa5.09□□□□□ -1.59
PTPN3-202ENST00000374541 A0A0U1RRA0 63 aa5.09□□□□□ -1.6
PTPN3-202ENST00000374541 SRRM5B3KS81 715 aa5.09□□□□□ -1.6
PTPN3-202ENST00000374541 SIVA1O15304 175 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 NDUFS6O75380 124 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 Q8N8P6 123 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 ATP6V0BQ99437 205 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 KLHDC3Q9BQ90 382 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 DENND4CQ5VZ89 1909 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 HEATR1Q9H583 2144 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 J3QRE1 110 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 RAMP3O60896 148 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 TMEM75Q8N9X5 138 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 TMEM126AQ9H061 195 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 VSIRQ9H7M9 311 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 SMG1Q96Q15 3661 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV1D-43A0A0B4J1Z2 117 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 CRLF1O75462 422 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 GLMPQ8WWB7 406 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 TRAV13-2A0A0B4J235 113 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV1-9A0A0C4DH69 117 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 SRRM4A7MD48 611 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 PMS2P5A8MQ11 134 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 A8MWP6 167 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 FCN3O75636 299 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 PPIFP30405 207 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 LOXL1Q08397 574 aaPredicted RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 C1orf159Q96HA4 380 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV2-40A0A087WW87 121 aaPredicted RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 TRGV1A0A0A0MS02 117 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 TGFBR3LH3BV60 316 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 LY6G6CO95867 125 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV2D-40P01614 121 aaPredicted RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 DUX4L9Q6RFH8 374 aaPredicted RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 RPP25LQ8N5L8 163 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 HS3ST6Q96QI5 342 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 CHD3Q12873 2000 aaKnown RBP5.08□□□□□ -1.6
PTPN3-202ENST00000374541 PRSS46E5RG02 174 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 NDUFB8O95169 186 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 ZNF664Q8N3J9 261 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 NABP1Q96AH0 204 aa5.08□□□□□ -1.6
PTPN3-202ENST00000374541 DOCK4Q8N1I0 1966 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 H3BQ85 93 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 C15orf32Q32M92 178 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 RMI2Q96E14 147 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 LTBP2Q14767 1821 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV2-26A0A0B4J1V2 119 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE7O76087 117 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 LHBP01229 141 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE12FP0CL80 117 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE12GP0CL81 117 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE12IP0CL82 117 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE4Q13068 117 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 LGALS9BQ3B8N2 356 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 LGALS9CQ6DKI2 356 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 TMEM256Q8N2U0 113 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 PAQR4Q8N4S7 273 aaPredicted RBP5.07□□□□□ -1.6
PTPN3-202ENST00000374541 CD55P08174 381 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 CCDC168Q8NDH2 2452 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV3OR16-8A0A075B7F1 116 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV4-59P01825 116 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 IGFL2Q6UWQ7 119 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 LYZL4Q96KX0 146 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms