RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 ERCC8Q13216 396 aa11.91□□□□□ -0.5
HDAC8-209ENST00000373589 Q8TAT8 98 aa11.91□□□□□ -0.5
HDAC8-209ENST00000373589 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
HDAC8-209ENST00000373589 GFRA4Q9GZZ7 299 aa11.91□□□□□ -0.5
HDAC8-209ENST00000373589 MTORP42345 2549 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 FAM231BA6NCW3 169 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 SPINK4O60575 86 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 CT45A10P0DMU9 189 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 HOXD3P31249 432 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-209ENST00000373589 C18orf65Q6ZTR6 163 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 GTSF1Q8WW33 167 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 C20orf173Q96LM9 149 aa11.9□□□□□ -0.5
HDAC8-209ENST00000373589 LY6G6DO95868 133 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 SRD5A1P18405 259 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 HOXA5P20719 270 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 SYNJ2BPP57105 145 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 COX19Q49B96 90 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 GPR61Q9BZJ8 451 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 BMI1P35226 326 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-209ENST00000373589 MRPL54Q6P161 138 aaKnown RBP11.89□□□□□ -0.51
HDAC8-209ENST00000373589 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 TMEM136Q6ZRR5 245 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 C9orf47Q6ZRZ4 202 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 TCF24Q7RTU0 167 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 C4orf3Q8WVX3 66 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 PPP1R14DQ9NXH3 145 aa11.89□□□□□ -0.51
HDAC8-209ENST00000373589 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
HDAC8-209ENST00000373589 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-209ENST00000373589 HILS1P60008 231 aa11.88□□□□□ -0.51
HDAC8-209ENST00000373589 RPL11P62913 178 aaKnown RBP11.88□□□□□ -0.51
HDAC8-209ENST00000373589 FAM162BQ5T6X4 162 aa11.88□□□□□ -0.51
HDAC8-209ENST00000373589 ZNF418Q8TF45 676 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-209ENST00000373589 NDFIP1Q9BT67 221 aa11.88□□□□□ -0.51
HDAC8-209ENST00000373589 MRPL18Q9H0U6 180 aaKnown RBP11.88□□□□□ -0.51
HDAC8-209ENST00000373589 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
HDAC8-209ENST00000373589 SH2D1AO60880 128 aa11.87□□□□□ -0.51
HDAC8-209ENST00000373589 MT-ND6P03923 174 aa11.87□□□□□ -0.51
HDAC8-209ENST00000373589 ZNF80P51504 273 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-209ENST00000373589 ATP5L2Q7Z4Y8 100 aa11.87□□□□□ -0.51
HDAC8-209ENST00000373589 HIVEP2P31629 2446 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 A0A1B0GXF2 115 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 ZNF138P52744 262 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 SMUG1Q53HV7 270 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
HDAC8-209ENST00000373589 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
HDAC8-209ENST00000373589 ZNF738Q8NE65 137 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 LINC01619G3V211 115 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 GZMBP10144 247 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 DEFB136Q30KP8 78 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 TMEM78Q5T7P6 136 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 SAMD13Q5VXD3 122 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 DCANP1Q8TF63 244 aa11.86□□□□□ -0.51
HDAC8-209ENST00000373589 IGKV3-7A0A075B6H7 116 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 C2orf70A6NJV1 201 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 OVOL1O14753 267 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 SLURP1P55000 103 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 SELENOKQ9Y6D0 94 aa11.85□□□□□ -0.51
HDAC8-209ENST00000373589 XKRY2A2RUG3 117 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 GDF5OSQ5U4N7 250 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 GFI1BQ5VTD9 330 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 OR1N2Q8NGR9 330 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 LINC01006Q8NI28 216 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 LENEPQ9Y5L5 61 aa11.84□□□□□ -0.51
HDAC8-209ENST00000373589 IFITM10A6NMD0 228 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 AKR1D1P51857 326 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
HDAC8-209ENST00000373589 ADAMTSL5Q6ZMM2 481 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 HIST3H2BBQ8N257 126 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 ZNF705DP0CH99 300 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-209ENST00000373589 ZNF705BP0CI00 300 aaPredicted RBP11.83□□□□□ -0.52
HDAC8-209ENST00000373589 RAB4BP61018 213 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 HBBP68871 147 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 KHDC1LQ5JSQ8 128 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 ZNF575Q86XF7 245 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 LINC00477Q96M19 166 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 MS4A6AQ9H2W1 248 aa11.83□□□□□ -0.52
HDAC8-209ENST00000373589 ID1P41134 155 aa11.82□□□□□ -0.52
HDAC8-209ENST00000373589 Q6AWC8 147 aa11.82□□□□□ -0.52
HDAC8-209ENST00000373589 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
HDAC8-209ENST00000373589 DPF1Q92782 380 aa11.82□□□□□ -0.52
HDAC8-209ENST00000373589 DEFB1P60022 68 aa11.81□□□□□ -0.52
HDAC8-209ENST00000373589 OR8A1Q8NGG7 326 aa11.81□□□□□ -0.52
HDAC8-209ENST00000373589 NDUFA7O95182 113 aa11.8□□□□□ -0.52
HDAC8-209ENST00000373589 APCSP02743 223 aa11.8□□□□□ -0.52
HDAC8-209ENST00000373589 CD28P10747 220 aa11.8□□□□□ -0.52
HDAC8-209ENST00000373589 CAMPP49913 170 aa11.8□□□□□ -0.52
HDAC8-209ENST00000373589 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
HDAC8-209ENST00000373589 SLAQ13239 276 aa11.8□□□□□ -0.52
HDAC8-209ENST00000373589 HIST2H2BDQ6DRA6 164 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms