RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 IGKV2-40A0A087WW87 121 aaPredicted RBP10.76□□□□□ -0.69
USP49-201ENST00000373006 VSTM5A8MXK1 200 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 SH2D1AO60880 128 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 IGKV2D-40P01614 121 aaPredicted RBP10.76□□□□□ -0.69
USP49-201ENST00000373006 GATA3P23771 443 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 NUP37Q8NFH4 326 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 RNF125Q96EQ8 232 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 ABHD17AQ96GS6 310 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 NCOR2Q9Y618 2525 aa10.76□□□□□ -0.69
USP49-201ENST00000373006 NDUFS7O75251 213 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 SMIM13P0DJ93 91 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 C8orf31Q8N9H6 132 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 GATD1Q8NB37 220 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 Q8TAT8 98 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 MSRB1Q9NZV6 116 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 AGRNO00468 2067 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 LYNX1G3V0Z9 82 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 H3BRN7 92 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 K7EIM0 57 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 TNFRSF13BO14836 293 aaPredicted RBP10.75□□□□□ -0.69
USP49-201ENST00000373006 TGFAP01135 160 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 LYNX1P0DP58 116 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 OR9G4Q8NGQ1 327 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 Q6AWC8 147 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 DPF1Q92782 380 aa10.75□□□□□ -0.69
USP49-201ENST00000373006 ANKHD1Q8IWZ3 2542 aaKnown RBP10.75□□□□□ -0.69
USP49-201ENST00000373006 IGKV2D-26A0A0A0MRZ7 120 aa10.74□□□□□ -0.69
USP49-201ENST00000373006 TRBV6-1A0A0K0K1D8 114 aa10.74□□□□□ -0.69
USP49-201ENST00000373006 CD300EQ496F6 205 aaPredicted RBP10.74□□□□□ -0.69
USP49-201ENST00000373006 BUB1B-PAK6H3BSN5 160 aa10.74□□□□□ -0.69
USP49-201ENST00000373006 EGR2P11161 476 aaPredicted RBP10.74□□□□□ -0.69
USP49-201ENST00000373006 AAMDCQ9H7C9 122 aa10.74□□□□□ -0.69
USP49-201ENST00000373006 U3KQK5 164 aa10.74□□□□□ -0.69
USP49-201ENST00000373006 OR4X2Q8NGF9 303 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 RPEQ96AT9 228 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 J3QR89 54 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 IGLV1-47P01700 117 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 PAX8Q06710 450 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
USP49-201ENST00000373006 DYNLRB1Q9NP97 96 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 MRPS12O15235 138 aaKnown RBP10.73□□□□□ -0.69
USP49-201ENST00000373006 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 OR5A1Q8NGJ0 315 aa10.73□□□□□ -0.69
USP49-201ENST00000373006 SPAG8Q99932 426 aaPredicted RBP10.73□□□□□ -0.69
USP49-201ENST00000373006 EVI2AP22794 236 aa10.72□□□□□ -0.69
USP49-201ENST00000373006 ZNF80P51504 273 aaPredicted RBP10.72□□□□□ -0.69
USP49-201ENST00000373006 ASCL5Q7RTU5 278 aa10.72□□□□□ -0.69
USP49-201ENST00000373006 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
USP49-201ENST00000373006 RNASE6Q93091 150 aaKnown RBP10.72□□□□□ -0.69
USP49-201ENST00000373006 WI2-2373I1.2A0A1W2PRP0 233 aa10.71□□□□□ -0.69
USP49-201ENST00000373006 THBDP07204 575 aa10.71□□□□□ -0.69
USP49-201ENST00000373006 PRSS1P07477 247 aa10.71□□□□□ -0.69
USP49-201ENST00000373006 SIVA1O15304 175 aa10.71□□□□□ -0.69
USP49-201ENST00000373006 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
USP49-201ENST00000373006 LEPP41159 167 aa10.71□□□□□ -0.69
USP49-201ENST00000373006 BSNQ9UPA5 3926 aa10.71□□□□□ -0.7
USP49-201ENST00000373006 GATA1P15976 413 aaPredicted RBP10.71□□□□□ -0.7
USP49-201ENST00000373006 GTSCR1Q86UQ5 136 aa10.71□□□□□ -0.7
USP49-201ENST00000373006 VGLL1Q99990 258 aa10.71□□□□□ -0.7
USP49-201ENST00000373006 IGHV3-35A0A0C4DH35 117 aa10.7□□□□□ -0.7
USP49-201ENST00000373006 ORM1P02763 201 aa10.7□□□□□ -0.7
USP49-201ENST00000373006 A0A0G2JNJ9 132 aa10.7□□□□□ -0.7
USP49-201ENST00000373006 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
USP49-201ENST00000373006 PRR25Q96S07 402 aa10.7□□□□□ -0.7
USP49-201ENST00000373006 Q9UFV3 132 aa10.7□□□□□ -0.7
USP49-201ENST00000373006 RALYQ9UKM9 306 aaKnown RBP10.7□□□□□ -0.7
USP49-201ENST00000373006 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
USP49-201ENST00000373006 TIMM23O14925 209 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 ODF1Q14990 250 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 GFRALQ6UXV0 394 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 GLMPQ8WWB7 406 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 KAAG1Q9UBP8 84 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 SPINK8P0C7L1 97 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 PIP4P1Q86T03 277 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 SYT8Q8NBV8 401 aa10.69□□□□□ -0.7
USP49-201ENST00000373006 ZNF562Q6V9R5 426 aa10.68□□□□□ -0.7
USP49-201ENST00000373006 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
USP49-201ENST00000373006 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
USP49-201ENST00000373006 ZNF479Q96JC4 524 aa10.68□□□□□ -0.7
USP49-201ENST00000373006 CHAC1Q9BUX1 264 aa10.68□□□□□ -0.7
USP49-201ENST00000373006 Q6ZS92 163 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 FOXC2Q99958 501 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 MAP1LC3AQ9H492 121 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 PRRG2O14669 202 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 CEACAM4O75871 244 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 FAM57AQ8TBR7 257 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 PTPRQQ9UMZ3 2332 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 B5MCH6 92 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 HES1Q14469 280 aa10.67□□□□□ -0.7
USP49-201ENST00000373006 RNF183Q96D59 192 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms