RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 ARPC1AQ92747 370 aa14.05□□□□□ -0.16
HNF4A-203ENST00000372920 PSMG3-AS1Q96PY0 264 aa14.05□□□□□ -0.16
HNF4A-203ENST00000372920 AKAP13Q12802 2813 aa14.05□□□□□ -0.16
HNF4A-203ENST00000372920 LINC01546A6NGU7 62 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 ODF1Q14990 250 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 HHLA3Q9XRX5 114 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 EVI2AP22794 236 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 ZNF562Q6V9R5 426 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 PIFOQ8TCI5 191 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 TTTY13Q9BZ97 58 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 CSMD1Q96PZ7 3565 aa14.04□□□□□ -0.16
HNF4A-203ENST00000372920 IGHV3OR16-8A0A075B7F1 116 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 ZNF672Q499Z4 452 aaPredicted RBP14.03□□□□□ -0.16
HNF4A-203ENST00000372920 NEGR1Q7Z3B1 354 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 TTC9CQ8N5M4 171 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 CNFNQ9BYD5 112 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 APC2O95996 2303 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 ANKRD11Q6UB99 2663 aaPredicted RBP14.03□□□□□ -0.16
HNF4A-203ENST00000372920 TNFRSF6BO95407 300 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 FCER1GP30273 86 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 CEACAM3P40198 252 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 ZMAT4Q9H898 229 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 CTSGP08311 255 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 OR5A1Q8NGJ0 315 aa14.03□□□□□ -0.16
HNF4A-203ENST00000372920 GCSHP23434 173 aa14.02□□□□□ -0.16
HNF4A-203ENST00000372920 SRSF2Q01130 221 aaKnown RBP14.02□□□□□ -0.16
HNF4A-203ENST00000372920 ERCC8Q13216 396 aa14.02□□□□□ -0.16
HNF4A-203ENST00000372920 NCBP2LA6PVI3 153 aaKnown RBP14.02□□□□□ -0.17
HNF4A-203ENST00000372920 PRSS1P07477 247 aa14.02□□□□□ -0.17
HNF4A-203ENST00000372920 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.17
HNF4A-203ENST00000372920 PRR30Q53SZ7 412 aaPredicted RBP14.02□□□□□ -0.17
HNF4A-203ENST00000372920 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.17
HNF4A-203ENST00000372920 SMIM13P0DJ93 91 aa14.02□□□□□ -0.17
HNF4A-203ENST00000372920 PPIFP30405 207 aaKnown RBP14.02□□□□□ -0.17
HNF4A-203ENST00000372920 FXYD2P54710 66 aa14.02□□□□□ -0.17
HNF4A-203ENST00000372920 DYNAPQ8N1N2 210 aa14.02□□□□□ -0.17
HNF4A-203ENST00000372920 NXT2Q9NPJ8 142 aaKnown RBP14.02□□□□□ -0.17
HNF4A-203ENST00000372920 IGHV3-35A0A0C4DH35 117 aa14.01□□□□□ -0.17
HNF4A-203ENST00000372920 LY6HO94772 140 aa14.01□□□□□ -0.17
HNF4A-203ENST00000372920 FABP2P12104 132 aa14.01□□□□□ -0.17
HNF4A-203ENST00000372920 SAMD5Q5TGI4 173 aa14.01□□□□□ -0.17
HNF4A-203ENST00000372920 LINC01560Q8TB33 94 aa14.01□□□□□ -0.17
HNF4A-203ENST00000372920 PRAC2D3DTV9 90 aa14□□□□□ -0.17
HNF4A-203ENST00000372920 HIGD1BQ9P298 99 aa14□□□□□ -0.17
HNF4A-203ENST00000372920 POLEQ07864 2286 aa14□□□□□ -0.17
HNF4A-203ENST00000372920 ODF3BA8MYP8 253 aa14□□□□□ -0.17
HNF4A-203ENST00000372920 IGKCP01834 107 aa14□□□□□ -0.17
HNF4A-203ENST00000372920 CHAC1Q9BUX1 264 aa14□□□□□ -0.17
HNF4A-203ENST00000372920 ZNF318Q5VUA4 2279 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 TMEM158Q8WZ71 300 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 FOXC2Q99958 501 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 PIEZO2Q9H5I5 2752 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 LINC01559Q495D7 138 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 PSMG4Q5JS54 123 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 GTSCR1Q86UQ5 136 aa13.99□□□□□ -0.17
HNF4A-203ENST00000372920 DTX2Q86UW9 622 aa13.98□□□□□ -0.17
HNF4A-203ENST00000372920 K7ERJ3 54 aa13.98□□□□□ -0.17
HNF4A-203ENST00000372920 RNF182Q8N6D2 247 aa13.98□□□□□ -0.17
HNF4A-203ENST00000372920 ARHGAP32A7KAX9 2087 aa13.98□□□□□ -0.17
HNF4A-203ENST00000372920 IL17RELQ6ZVW7 336 aa13.97□□□□□ -0.17
HNF4A-203ENST00000372920 GVINP1Q7Z2Y8 2422 aa13.97□□□□□ -0.17
HNF4A-203ENST00000372920 TRBV25-1A0A075B6N4 114 aa13.97□□□□□ -0.17
HNF4A-203ENST00000372920 SCGB2A1O75556 95 aa13.97□□□□□ -0.17
HNF4A-203ENST00000372920 ACACAQ13085 2346 aa13.97□□□□□ -0.17
HNF4A-203ENST00000372920 ZC2HC1BQ5TFG8 222 aa13.97□□□□□ -0.17
HNF4A-203ENST00000372920 TMEM8BA6NDV4 472 aa13.96□□□□□ -0.17
HNF4A-203ENST00000372920 DPM2O94777 84 aa13.96□□□□□ -0.17
HNF4A-203ENST00000372920 PRTN3P24158 256 aa13.96□□□□□ -0.17
HNF4A-203ENST00000372920 Q8N8P6 123 aa13.96□□□□□ -0.17
HNF4A-203ENST00000372920 DCHS2Q6V1P9 2916 aa13.96□□□□□ -0.17
HNF4A-203ENST00000372920 TTC28Q96AY4 2481 aa13.96□□□□□ -0.17
HNF4A-203ENST00000372920 IGLV2-18A0A075B6J9 118 aa13.96□□□□□ -0.18
HNF4A-203ENST00000372920 IGKV3D-20A0A0C4DH25 116 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 M0R1W7 72 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 ATP5LO75964 103 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 TRGV3P03979 118 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 Q8N6K4 173 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 SMPXQ9UHP9 88 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 TMEM238C9JI98 176 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 SMIM17P0DL12 118 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 PHLDA1Q8WV24 401 aaPredicted RBP13.95□□□□□ -0.18
HNF4A-203ENST00000372920 C11orf21Q9P2W6 132 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 LRBAP50851 2863 aa13.95□□□□□ -0.18
HNF4A-203ENST00000372920 TMEM160Q9NX00 188 aa13.94□□□□□ -0.18
HNF4A-203ENST00000372920 IGHV7-81A0A0B4J1V7 117 aa13.94□□□□□ -0.18
HNF4A-203ENST00000372920 GRNP28799 593 aaKnown RBP13.94□□□□□ -0.18
HNF4A-203ENST00000372920 NHP2Q9NX24 153 aaKnown RBP13.94□□□□□ -0.18
HNF4A-203ENST00000372920 TRAV40A0A0B4J280 105 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 IGHV3-66A0A0C4DH42 116 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 VMO1Q7Z5L0 202 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 BUB3O43684 328 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 CEND1Q8N111 149 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 TM2D2Q9BX73 214 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 K7EMI3 77 aa13.93□□□□□ -0.18
HNF4A-203ENST00000372920 MRPL35Q9NZE8 188 aaKnown RBP13.93□□□□□ -0.18
HNF4A-203ENST00000372920 TMEM11P17152 192 aa13.92□□□□□ -0.18
HNF4A-203ENST00000372920 AGPAT4-IT1Q9H0P7 198 aa13.92□□□□□ -0.18
HNF4A-203ENST00000372920 ZFAND3Q9H8U3 227 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms