RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ELOBQ15370 118 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 ZNF124Q15973 351 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 LINC00322Q6ZN03 302 aaPredicted RBP11.8□□□□□ -0.52
PFDN4-201ENST00000371419 LINC01551Q86U37 167 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 C16orf92Q96LL3 132 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 TGP01266 2768 aa11.79□□□□□ -0.52
PFDN4-201ENST00000371419 C1orf196B1AJZ1 125 aa11.79□□□□□ -0.52
PFDN4-201ENST00000371419 H7BYZ3 331 aa11.79□□□□□ -0.52
PFDN4-201ENST00000371419 S100PP25815 95 aa11.79□□□□□ -0.52
PFDN4-201ENST00000371419 RAB5BP61020 215 aa11.79□□□□□ -0.52
PFDN4-201ENST00000371419 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
PFDN4-201ENST00000371419 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
PFDN4-201ENST00000371419 GGTLC3B5MD39 225 aa11.78□□□□□ -0.52
PFDN4-201ENST00000371419 NBEAP1P0C6P0 100 aa11.78□□□□□ -0.52
PFDN4-201ENST00000371419 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
PFDN4-201ENST00000371419 ASCL2Q99929 193 aa11.78□□□□□ -0.52
PFDN4-201ENST00000371419 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
PFDN4-201ENST00000371419 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
PFDN4-201ENST00000371419 IGLC2P0DOY2 106 aa11.77□□□□□ -0.52
PFDN4-201ENST00000371419 RPL35P42766 123 aaKnown RBP11.77□□□□□ -0.52
PFDN4-201ENST00000371419 TAS2R60P59551 318 aa11.77□□□□□ -0.52
PFDN4-201ENST00000371419 C2CD4CQ8TF44 421 aa11.77□□□□□ -0.52
PFDN4-201ENST00000371419 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
PFDN4-201ENST00000371419 GNG4P50150 75 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 BTF3L4Q96K17 158 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 DNAH9Q9NYC9 4486 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 TRAV8-2A0A0B4J237 113 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 SNRPCP09234 159 aaKnown RBP11.76□□□□□ -0.53
PFDN4-201ENST00000371419 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
PFDN4-201ENST00000371419 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
PFDN4-201ENST00000371419 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
PFDN4-201ENST00000371419 KCNIP4Q6PIL6 250 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 STHQ8IWL8 128 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
PFDN4-201ENST00000371419 TRBV20OR9-2A0A075B6H5 130 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 S100A9P06702 114 aaKnown RBP11.75□□□□□ -0.53
PFDN4-201ENST00000371419 APOC4P55056 127 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
PFDN4-201ENST00000371419 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 SFRP2Q96HF1 295 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 C20orf173Q96LM9 149 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 SLC50A1Q9BRV3 221 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
PFDN4-201ENST00000371419 KIR2DL5BA0A0G2JN68 375 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 KIR2DL5BA0A0G2JPC4 375 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 H3BTX0 84 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 PEX7O00628 323 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 PFN1P07737 140 aaKnown RBP11.74□□□□□ -0.53
PFDN4-201ENST00000371419 RPS10P46783 165 aaKnown RBP11.74□□□□□ -0.53
PFDN4-201ENST00000371419 CENPWQ5EE01 88 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 IGFL4Q6B9Z1 124 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 KIR2DL5AQ8N109 375 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 RNF182Q8N6D2 247 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 KIR2DL5BQ8NHK3 375 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 ZNF331Q9NQX6 463 aaPredicted RBP11.74□□□□□ -0.53
PFDN4-201ENST00000371419 EPDR1Q9UM22 224 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 COL7A1Q02388 2944 aa11.74□□□□□ -0.53
PFDN4-201ENST00000371419 TGIF2-C20orf24A0A0A6YYL0 155 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 PGPA6NDG6 321 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 SLC17A3O00476 420 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
PFDN4-201ENST00000371419 CXCL1P09341 107 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 FOXI2Q6ZQN5 318 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
PFDN4-201ENST00000371419 LYPD1Q8N2G4 141 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 TM2D3Q9BRN9 247 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 SAV1Q9H4B6 383 aaPredicted RBP11.73□□□□□ -0.53
PFDN4-201ENST00000371419 OTORQ9NRC9 128 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 NBEAL2Q6ZNJ1 2754 aa11.73□□□□□ -0.53
PFDN4-201ENST00000371419 AGRNO00468 2067 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 PGPEP1LA6NFU8 196 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 UBE2CO00762 179 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 ZNF253O75346 499 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 HLA-DRB4P13762 266 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 PDE6HQ13956 83 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 PSG3Q16557 428 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 EBLN2Q6P2I7 272 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 IGF2BP2-AS1Q96M15 143 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 Q9H3A6 140 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 BIN3Q9NQY0 253 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 HLA-DRB4X5D2U9 266 aa11.72□□□□□ -0.53
PFDN4-201ENST00000371419 H3BMM0 161 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 HLA-DMBP28068 263 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 DEFB1P60022 68 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 SMIM12Q96EX1 92 aa11.71□□□□□ -0.53
PFDN4-201ENST00000371419 SPATA25Q9BR10 227 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms