RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 C5orf63A6NC05 138 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 ODF3L1Q8IXM7 274 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 SPTBN1Q01082 2364 aaKnown RBP8.34□□□□□ -1.07
PRDM1-201ENST00000369089 ESPL1Q14674 2120 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 GDF5OSQ5U4N7 250 aa8.34□□□□□ -1.07
PRDM1-201ENST00000369089 SRCAPQ6ZRS2 3230 aa8.34□□□□□ -1.08
PRDM1-201ENST00000369089 PRR20EP86478 221 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 PRR20CP86479 221 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 PRR20DP86480 221 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 PRR20BP86481 221 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 PRR20AP86496 221 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 FOXF2Q12947 444 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 FAM120AOSQ5T036 256 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 SNRNP200O75643 2136 aaKnown RBP8.33□□□□□ -1.08
PRDM1-201ENST00000369089 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 CNTFRP26992 372 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 DIAPH2-AS1Q14236 149 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 LINC00477Q96M19 166 aa8.33□□□□□ -1.08
PRDM1-201ENST00000369089 Q6ZQT7 251 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 SERP2Q8N6R1 65 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 TSC2P49815 1807 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 PLXNA3P51805 1871 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 TNFAIP6P98066 277 aaPredicted RBP8.32□□□□□ -1.08
PRDM1-201ENST00000369089 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 C19orf54Q5BKX5 351 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 C2orf66Q6UXQ4 117 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 DSCR8Q96T75 97 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 TRAV3A0A0B4J244 114 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 CGB1A6NKQ9 187 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 J3QQQ9 107 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 TEX36Q5VZQ5 186 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 ZNF826PQ6ZT77 177 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 LEAP2Q969E1 77 aa8.32□□□□□ -1.08
PRDM1-201ENST00000369089 WIPF1O43516 503 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 CRLF1O75462 422 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
PRDM1-201ENST00000369089 POLEQ07864 2286 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 FANCMQ8IYD8 2048 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 E9PLN8 166 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 MBD3L4A6NDZ8 208 aaPredicted RBP8.31□□□□□ -1.08
PRDM1-201ENST00000369089 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
PRDM1-201ENST00000369089 MBD3L5A6NJ08 208 aaPredicted RBP8.31□□□□□ -1.08
PRDM1-201ENST00000369089 LINC00473A8K010 186 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 EFNA4P52798 201 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 SLC25A53Q5H9E4 307 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
PRDM1-201ENST00000369089 SHANK1Q9Y566 2161 aa8.31□□□□□ -1.08
PRDM1-201ENST00000369089 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 NDUFB3O43676 98 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 TMEM30BQ3MIR4 351 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 LYPD1Q8N2G4 141 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.3□□□□□ -1.08
PRDM1-201ENST00000369089 CXCL5P42830 114 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 DAD1P61803 113 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 IGLV3-12A0A075B6K2 115 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 IQCF6A8MYZ5 107 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 BAALC-AS2P0C853 105 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 ZNF883P0CG24 379 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 CFHR1Q03591 330 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 NFE4Q86UQ8 179 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 KLK5Q9Y337 293 aaPredicted RBP8.3□□□□□ -1.08
PRDM1-201ENST00000369089 MDC1Q14676 2089 aaKnown RBP8.3□□□□□ -1.08
PRDM1-201ENST00000369089 C20orf204Q6ZNR8 217 aa8.3□□□□□ -1.08
PRDM1-201ENST00000369089 SAA1P0DJI8 122 aaPredicted RBP8.29□□□□□ -1.08
PRDM1-201ENST00000369089 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
PRDM1-201ENST00000369089 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 AKAP6Q13023 2319 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 ZNHIT1O43257 154 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 MRPL14Q6P1L8 145 aaKnown RBP8.29□□□□□ -1.08
PRDM1-201ENST00000369089 MRPS12O15235 138 aaKnown RBP8.29□□□□□ -1.08
PRDM1-201ENST00000369089 TIMM21Q9BVV7 248 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 PMS2P5A8MQ11 134 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 IMMP1LQ96LU5 166 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 PRORYQ9H606 182 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 NOTCH4Q99466 2003 aa8.29□□□□□ -1.08
PRDM1-201ENST00000369089 NLRC5Q86WI3 1866 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 CRPP02741 224 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 ATP1A1-AS1Q5TC04 95 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 SRXN1Q9BYN0 137 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 COL4A6Q14031 1691 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 FAM74A4Q5TZK3 123 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 C17orf82Q86X59 251 aaPredicted RBP8.28□□□□□ -1.08
PRDM1-201ENST00000369089 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 KIR2DL5BQ8NHK3 375 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 CCL17Q92583 94 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 GHRHP01286 108 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 RFPL3SP0C7P2 107 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 ZNRF2Q8NHG8 242 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
PRDM1-201ENST00000369089 LY6DQ14210 128 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms