RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CNTFRP26992 372 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 CNFNQ9BYD5 112 aa13.65□□□□□ -0.22
CHTOP-203ENST00000368690 IGKV2D-26A0A0A0MRZ7 120 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 K7EIM0 57 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
CHTOP-203ENST00000368690 IGKCP01834 107 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 BMI1P35226 326 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 TCTAP57738 103 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 FXYD7P58549 80 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 SPATA25Q9BR10 227 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 SPANXB1Q9NS25 103 aaPredicted RBP13.64□□□□□ -0.23
CHTOP-203ENST00000368690 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 C16orf97H3BN30 126 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 M0R3E3 92 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 ASCL2Q99929 193 aa13.64□□□□□ -0.23
CHTOP-203ENST00000368690 A0A1B0GV72 72 aa13.63□□□□□ -0.23
CHTOP-203ENST00000368690 TWIST1Q15672 202 aa13.63□□□□□ -0.23
CHTOP-203ENST00000368690 LYPD2Q6UXB3 125 aa13.63□□□□□ -0.23
CHTOP-203ENST00000368690 IGHV1-3A0A0C4DH29 117 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 GAGE12HA6NDE8 117 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 IGLV1-47P01700 117 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 TM4SF20Q53R12 229 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 C22orf34Q6ZV56 151 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 RNF185Q96GF1 192 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 RAB1BQ9H0U4 201 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 PRR25Q96S07 402 aa13.62□□□□□ -0.23
CHTOP-203ENST00000368690 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 FAM90A27PA6NNH2 459 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 SMKR1H3BMG3 65 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 DPM2O94777 84 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 IL4P05112 153 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 EGR2P11161 476 aaPredicted RBP13.61□□□□□ -0.23
CHTOP-203ENST00000368690 LEPP41159 167 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 ADIPOQQ15848 244 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 TMEM108Q6UXF1 575 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 PLCE1Q9P212 2302 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 IGLL5B9A064 214 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 KLF17Q5JT82 389 aaPredicted RBP13.61□□□□□ -0.23
CHTOP-203ENST00000368690 ZNF48Q96MX3 618 aaPredicted RBP13.61□□□□□ -0.23
CHTOP-203ENST00000368690 C18orf15Q96N68 181 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 GTSF1LQ9H1H1 148 aa13.61□□□□□ -0.23
CHTOP-203ENST00000368690 FBXL15Q9H469 300 aa13.6□□□□□ -0.23
CHTOP-203ENST00000368690 NHP2Q9NX24 153 aaKnown RBP13.6□□□□□ -0.23
CHTOP-203ENST00000368690 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
CHTOP-203ENST00000368690 PRSS1P07477 247 aa13.59□□□□□ -0.23
CHTOP-203ENST00000368690 ZNF502Q8TBZ5 544 aa13.59□□□□□ -0.23
CHTOP-203ENST00000368690 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
CHTOP-203ENST00000368690 BUB1B-PAK6H3BSN5 160 aa13.59□□□□□ -0.23
CHTOP-203ENST00000368690 K7ERJ3 54 aa13.59□□□□□ -0.23
CHTOP-203ENST00000368690 PSMG3-AS1Q96PY0 264 aa13.59□□□□□ -0.23
CHTOP-203ENST00000368690 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
CHTOP-203ENST00000368690 LINC01619G3V211 115 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 TNFRSF6BO95407 300 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 WFDC3Q8IUB2 231 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 ZNF479Q96JC4 524 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 ATP6V0BQ99437 205 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 SMAGPQ0VAQ4 97 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 Q8N8P6 123 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 CCL17Q92583 94 aa13.58□□□□□ -0.24
CHTOP-203ENST00000368690 MALRD1Q5VYJ5 2156 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 USP24Q9UPU5 2620 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 NPIPB5A8MRT5 1133 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 PRSS47A8MTI9 375 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 WFDC2Q14508 124 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 ZC2HC1BQ5TFG8 222 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 ZNF575Q86XF7 245 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
CHTOP-203ENST00000368690 RPL7P18124 248 aaKnown RBP13.56□□□□□ -0.24
CHTOP-203ENST00000368690 FOXC2Q99958 501 aa13.56□□□□□ -0.24
CHTOP-203ENST00000368690 IGSF10Q6WRI0 2623 aa13.56□□□□□ -0.24
CHTOP-203ENST00000368690 C12orf74Q32Q52 190 aa13.56□□□□□ -0.24
CHTOP-203ENST00000368690 TTTY13Q9BZ97 58 aa13.56□□□□□ -0.24
CHTOP-203ENST00000368690 IGKV2-40A0A087WW87 121 aaPredicted RBP13.55□□□□□ -0.24
CHTOP-203ENST00000368690 A0A1B0GWB2 263 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 IGKV2D-40P01614 121 aaPredicted RBP13.55□□□□□ -0.24
CHTOP-203ENST00000368690 TCTEX1D4Q5JR98 221 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 GTSCR1Q86UQ5 136 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 IGLV2-18A0A075B6J9 118 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
CHTOP-203ENST00000368690 ADORA2A-AS1P86434 159 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 TMEM158Q8WZ71 300 aa13.55□□□□□ -0.24
CHTOP-203ENST00000368690 SPAG8Q99932 426 aaPredicted RBP13.55□□□□□ -0.24
CHTOP-203ENST00000368690 CNIH1O95406 144 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 TTC9CQ8N5M4 171 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 RPEQ96AT9 228 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 FABP5P3A8MUU1 101 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 MFAP4P55083 255 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 BSPH1Q075Z2 132 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 CCDC144NLQ6NUI1 221 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 PRO0461Q9UI25 63 aa13.54□□□□□ -0.24
CHTOP-203ENST00000368690 LY6LH3BQJ8 138 aa13.53□□□□□ -0.24
CHTOP-203ENST00000368690 GOSR1O95249 250 aa13.53□□□□□ -0.24
CHTOP-203ENST00000368690 RRN3P1Q2M238 152 aa13.53□□□□□ -0.24
CHTOP-203ENST00000368690 GAGE13Q4V321 117 aa13.53□□□□□ -0.24
CHTOP-203ENST00000368690 MSRB1Q9NZV6 116 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms