RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 LGALS9CQ6DKI2 356 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 C8orf31Q8N9H6 132 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 VGLL1Q99990 258 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
PRKN-205ENST00000366897 GNG7O60262 68 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 HSD52Q0P140 79 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
PRKN-205ENST00000366897 E7EQL1 145 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 FXYD2P54710 66 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 GFRALQ6UXV0 394 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 ONECUT1Q9UBC0 465 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 HELZ2Q9BYK8 2649 aaKnown RBP10.62□□□□□ -0.71
PRKN-205ENST00000366897 COL12A1Q99715 3063 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 HES1Q14469 280 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 Q6ZS92 163 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 FAM57AQ8TBR7 257 aa10.62□□□□□ -0.71
PRKN-205ENST00000366897 TMEM238C9JI98 176 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 CEACAM4O75871 244 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 ORM1P02763 201 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
PRKN-205ENST00000366897 GATD1Q8NB37 220 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 OR1N2Q8NGR9 330 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 GCN1Q92616 2671 aaKnown RBP10.61□□□□□ -0.71
PRKN-205ENST00000366897 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 PAX8Q06710 450 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 KLRD1Q13241 179 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
PRKN-205ENST00000366897 PPIAL4CA0A0B4J2A2 164 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 A0A1B0GW15 77 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 PPIAL4GP0DN37 164 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 PAX2Q02962 417 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 Q6AWC8 147 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 U3KQK5 164 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 G3V4G9 280 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 PRSS1P07477 247 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 LEPP41159 167 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 ERCC8Q13216 396 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 PRR25Q96S07 402 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 JKAMPQ9P055 326 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 AGRNO00468 2067 aa10.6□□□□□ -0.71
PRKN-205ENST00000366897 OR9G4Q8NGQ1 327 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 IGHV3OR16-13A0A075B7E8 117 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 IGHV3-74A0A0B4J1X5 117 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 KAAG1Q9UBP8 84 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 IGHV3-66A0A0C4DH42 116 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 SHISA9B4DS77 424 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 NPFFR1Q9GZQ6 430 aa10.59□□□□□ -0.71
PRKN-205ENST00000366897 SAMD5Q5TGI4 173 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 ZNF575Q86XF7 245 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 NDPQ00604 133 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 OR4X2Q8NGF9 303 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 FOXC2Q99958 501 aa10.58□□□□□ -0.72
PRKN-205ENST00000366897 PRAC2D3DTV9 90 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 F8W735 103 aaPredicted RBP10.57□□□□□ -0.72
PRKN-205ENST00000366897 FABP2P12104 132 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 DPF1Q92782 380 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 RNF185Q96GF1 192 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 NHP2Q9NX24 153 aaKnown RBP10.57□□□□□ -0.72
PRKN-205ENST00000366897 TEX48A0A1B0GUV7 120 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 PRRG2O14669 202 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
PRKN-205ENST00000366897 TRAV26-2A0A0B4J265 109 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 NBR2O15453 112 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 ODF1Q14990 250 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 PRR30Q53SZ7 412 aaPredicted RBP10.56□□□□□ -0.72
PRKN-205ENST00000366897 Q6ZQT7 251 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
PRKN-205ENST00000366897 IGHG4P01861 327 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 TMEM11P17152 192 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 IGFL3Q6UXB1 125 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 TMEM158Q8WZ71 300 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 MAP1LC3AQ9H492 121 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 HHLA3Q9XRX5 114 aa10.56□□□□□ -0.72
PRKN-205ENST00000366897 IGHV3-49A0A0A0MS15 119 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 TNFRSF6BO95407 300 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 SMIM13P0DJ93 91 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 BAHCC1Q9P281 2608 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 ZC2HC1BQ5TFG8 222 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 TNFRSF14Q92956 283 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 SPRY2O43597 315 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 TRGV3P03979 118 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 PLA2G2AP14555 144 aa10.55□□□□□ -0.72
PRKN-205ENST00000366897 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 VSTM5A8MXK1 200 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms