RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 OR11H6Q8NGC7 330 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 PYGO2Q9BRQ0 406 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 RNF114Q9Y508 228 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 ABCA2Q9BZC7 2435 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 SIVA1O15304 175 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 ESDP10768 282 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 GLMPQ8WWB7 406 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 K7EM74 188 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 DNAJC30Q96LL9 226 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 C9JQL5 133 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 ERCC8Q13216 396 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 SLX1AQ9BQ83 275 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 GAGE12BA1L429 117 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZNF581Q9P0T4 197 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 CRIM1Q9NZV1 1036 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 TDGF1P3P51864 188 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 H3BRN7 92 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 CD300EQ496F6 205 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 MPV17L2Q567V2 206 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 CHCHD5Q9BSY4 110 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 TAL2Q16559 108 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
CDC42BPA-203ENST00000366766 IGHV2-70DA0A0C4DH43 119 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 NCR2O95944 276 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 GAGE2BQ13066 116 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 GAGE2EQ4V326 116 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 GAGE2DQ9UEU5 116 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 DSCAML1Q8TD84 2053 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 COL5A1P20908 1838 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 WDR86Q86TI4 376 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 ANAPC13Q9BS18 74 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 DKK1O94907 266 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 IGKV1-39P01597 117 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 IGKV1D-39P04432 117 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 Q6ZR03 302 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 ATP6V0BQ99437 205 aa9.66□□□□□ -0.86
CDC42BPA-203ENST00000366766 PRR25Q96S07 402 aa9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 C14orf178Q8N769 122 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 Q8TAT8 98 aa9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 PHLDA1Q8WV24 401 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 VOPP1Q96AW1 172 aa9.65□□□□□ -0.86
CDC42BPA-203ENST00000366766 USP9XQ93008 2570 aaPredicted RBP9.65□□□□□ -0.87
CDC42BPA-203ENST00000366766 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.87
CDC42BPA-203ENST00000366766 A0A087WX48 190 aa9.65□□□□□ -0.87
CDC42BPA-203ENST00000366766 LOXP28300 417 aaPredicted RBP9.65□□□□□ -0.87
CDC42BPA-203ENST00000366766 CEP295Q9C0D2 2601 aa9.65□□□□□ -0.87
CDC42BPA-203ENST00000366766 WT1-ASQ06250 92 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 TMEM219Q86XT9 240 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGFBPL1Q8WX77 278 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 MSMBP08118 114 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 LYPD2Q6UXB3 125 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 POLR3KQ9Y2Y1 108 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PPIFP30405 207 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRR20EP86478 221 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRR20CP86479 221 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRR20DP86480 221 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRR20BP86481 221 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PRR20AP86496 221 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PMVKQ15126 192 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 LTAP01374 205 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 COX8AP10176 69 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 SFTA2Q6UW10 78 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 SPTBN4Q9H254 2564 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGHV4-39P01824 125 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 FXYD5Q96DB9 178 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 A0A087X0K7 114 aa9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 KLF5Q13887 457 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPA-203ENST00000366766 LHBP01229 141 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 I3L3M4 83 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 F8W1H4 67 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 PIP4P1Q86T03 277 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 INS-IGF2F8WCM5 200 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 KLRD1Q13241 179 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGHV1-69DA0A0B4J2H0 117 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGHV1-69P01742 117 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 SHISA9B4DS77 424 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 FCN3O75636 299 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGLC3P0DOY3 106 aa9.63□□□□□ -0.87
CDC42BPA-203ENST00000366766 IGLC1P0CG04 106 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms