RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
VAMP1-201ENST00000361716 RPEQ96AT9 228 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 GAFA1Q96PS6 74 aa10.07□□□□□ -0.8
VAMP1-201ENST00000361716 CSMD1Q96PZ7 3565 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 TRBV20-1A0A075B6N2 111 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 PTPRBP23467 1997 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 GLRXP35754 106 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 ZNF474Q6S9Z5 364 aaPredicted RBP10.06□□□□□ -0.8
VAMP1-201ENST00000361716 C22orf34Q6ZV56 151 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 RASL11BQ9BPW5 248 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 MAP1LC3AQ9H492 121 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 A0A1W2PPI3 338 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 FAM90A27PA6NNH2 459 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 ASCL5Q7RTU5 278 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 TMEM158Q8WZ71 300 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 TMEM133Q9H2Q1 129 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 KLF12Q9Y4X4 402 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 ACACBO00763 2458 aa10.06□□□□□ -0.8
VAMP1-201ENST00000361716 SIVA1O15304 175 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 IL4P05112 153 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 PRTN3P24158 256 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
VAMP1-201ENST00000361716 SLC25A15Q9Y619 301 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
VAMP1-201ENST00000361716 C16orf97H3BN30 126 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 DPM2O94777 84 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
VAMP1-201ENST00000361716 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 C1orf122Q6ZSJ8 110 aa10.05□□□□□ -0.8
VAMP1-201ENST00000361716 NCBP2LA6PVI3 153 aaKnown RBP10.04□□□□□ -0.8
VAMP1-201ENST00000361716 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 SLC25A39Q9BZJ4 359 aaPredicted RBP10.04□□□□□ -0.8
VAMP1-201ENST00000361716 GP9P14770 177 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 MYCNOSP40205 109 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 XGP55808 180 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 CR1LQ2VPA4 569 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
VAMP1-201ENST00000361716 E9PLD3 99 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 MYOZ3Q8TDC0 251 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 ONECUT1Q9UBC0 465 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 DOPEY2Q9Y3R5 2298 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 IGHV3-66A0A0C4DH42 116 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
VAMP1-201ENST00000361716 FOXI1Q12951 378 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 ZNF502Q8TBZ5 544 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 C8orf46Q8TAG6 207 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
VAMP1-201ENST00000361716 SH2D1AO60880 128 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 CRIP1P50238 77 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 EFNA4P52798 201 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 FOXC1Q12948 553 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 ZNF562Q6V9R5 426 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 TEX29Q8N6K0 151 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 CD40P25942 277 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 RRN3P1Q2M238 152 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.02□□□□□ -0.81
VAMP1-201ENST00000361716 CACNA1AO00555 2505 aa10.02□□□□□ -0.81
VAMP1-201ENST00000361716 LRBAP50851 2863 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 HERV-K104P63124 156 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 ODF1Q14990 250 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 ZFP2Q6ZN57 461 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 LINC01548A6NM66 108 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 OR11H12B2RN74 326 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 LY6HO94772 140 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 OR11H1Q8NG94 326 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 OR11H2Q8NH07 326 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 DPF1Q92782 380 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 HLA-DRB4P13762 266 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 Q6ZUT4 128 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 HLA-DRB4X5D2U9 266 aa10.01□□□□□ -0.81
VAMP1-201ENST00000361716 PCSK5Q92824 1860 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 ASH1LQ9NR48 2969 aaKnown RBP10□□□□□ -0.81
VAMP1-201ENST00000361716 CFAP161Q6P656 301 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 SHISA2Q6UWI4 295 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 NGBQ9NPG2 151 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 EMP1P54849 157 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 SPRY4Q9C004 299 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 C2CD3Q4AC94 2353 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 IGLV2-11P01706 119 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 BSPH1Q075Z2 132 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 LINC00312Q9Y6C7 94 aa10□□□□□ -0.81
VAMP1-201ENST00000361716 SORL1Q92673 2214 aa9.99□□□□□ -0.81
VAMP1-201ENST00000361716 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
VAMP1-201ENST00000361716 ZNF883P0CG24 379 aa9.99□□□□□ -0.81
VAMP1-201ENST00000361716 ATP5IP56385 69 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 327.1 ms