RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PSG9Q00887 426 aa11.12□□□□□ -0.63
NIPAL3-203ENST00000358028 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
NIPAL3-203ENST00000358028 CUBNO60494 3623 aa11.12□□□□□ -0.63
NIPAL3-203ENST00000358028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 OR5AL1P0C617 328 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 LINC01356Q8N9X3 169 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 YAE1D1Q9NRH1 226 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 MXRA5Q9NR99 2828 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 TRAV9-2A0A087WT02 112 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 OR2T8A6NH00 312 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 C2orf70A6NJV1 201 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 SH2D7A6NKC9 451 aaPredicted RBP11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 TGFAP01135 160 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 CSN1S1P47710 185 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 EBLN2Q6P2I7 272 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
NIPAL3-203ENST00000358028 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 B4DSR2 109 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 CRXO43186 299 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 CTSGP08311 255 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 RPL7P18124 248 aaKnown RBP11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 TMEM70Q9BUB7 260 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
NIPAL3-203ENST00000358028 CENPVL3A0A0U1RRI6 287 aa11.09□□□□□ -0.63
NIPAL3-203ENST00000358028 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
NIPAL3-203ENST00000358028 MSMBP08118 114 aa11.09□□□□□ -0.63
NIPAL3-203ENST00000358028 LINC00614P0C842 121 aa11.09□□□□□ -0.63
NIPAL3-203ENST00000358028 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
NIPAL3-203ENST00000358028 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
NIPAL3-203ENST00000358028 RABAC1Q9UI14 185 aa11.08□□□□□ -0.64
NIPAL3-203ENST00000358028 PAX8Q06710 450 aa11.08□□□□□ -0.64
NIPAL3-203ENST00000358028 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
NIPAL3-203ENST00000358028 COL5A1-AS1Q5SY13 56 aa11.08□□□□□ -0.64
NIPAL3-203ENST00000358028 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
NIPAL3-203ENST00000358028 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
NIPAL3-203ENST00000358028 M0R3E3 92 aa11.07□□□□□ -0.64
NIPAL3-203ENST00000358028 HNRNPA3P51991 378 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-203ENST00000358028 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
NIPAL3-203ENST00000358028 Q6ZN92 141 aa11.07□□□□□ -0.64
NIPAL3-203ENST00000358028 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-203ENST00000358028 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 ATRQ13535 2644 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 GPR183P32249 361 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 RHOGP84095 191 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 C15orf32Q32M92 178 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 ZNF493Q6ZR52 646 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 IL17RELQ6ZVW7 336 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
NIPAL3-203ENST00000358028 LEPROTL1O95214 131 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 CRIP1P50238 77 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 RAB9AP51151 201 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 RPS20P60866 119 aaKnown RBP11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 GAGE1Q13065 139 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 ASCL2Q99929 193 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 HSPB8Q9UJY1 196 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 IGHV3OR16-10A0A075B7F0 116 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 IGHV1-69DA0A0B4J2H0 117 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 IGHV1-69P01742 117 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 SMAD5-AS1Q9Y6J3 95 aa11.05□□□□□ -0.64
NIPAL3-203ENST00000358028 G3V318 75 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 SRSF2Q01130 221 aaKnown RBP11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 PET117Q6UWS5 81 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 ST20Q9HBF5 79 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 LAMTOR2Q9Y2Q5 125 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 MOB4Q9Y3A3 225 aa11.04□□□□□ -0.64
NIPAL3-203ENST00000358028 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 ZNF25P17030 456 aaPredicted RBP11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 TSPOP30536 169 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 EEF1AKMT3Q96AZ1 226 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 IGHV3-35A0A0C4DH35 117 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 SH2D1AO60880 128 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 CRLF1O75462 422 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 AVPP01185 164 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 CLEC3BP05452 202 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 BMI1P35226 326 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 PRR31Q5SQ13 230 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 ATOH7Q8N100 152 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 CCDC140Q96MF4 163 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 COL6A5A8TX70 2615 aa11.03□□□□□ -0.64
NIPAL3-203ENST00000358028 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
NIPAL3-203ENST00000358028 IGKV2-40A0A087WW87 121 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms