RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 TMEM158Q8WZ71 300 aa18.42■□□□□ 0.54
NPAS3-203ENST00000357798 ROS1P08922 2347 aa18.42■□□□□ 0.54
NPAS3-203ENST00000357798 SMAD5-AS1Q9Y6J3 95 aa18.42■□□□□ 0.54
NPAS3-203ENST00000357798 GTSCR1Q86UQ5 136 aa18.42■□□□□ 0.54
NPAS3-203ENST00000357798 NHP2Q9NX24 153 aaKnown RBP18.42■□□□□ 0.54
NPAS3-203ENST00000357798 E9PLD3 99 aa18.41■□□□□ 0.54
NPAS3-203ENST00000357798 SCGB1A1P11684 91 aa18.41■□□□□ 0.54
NPAS3-203ENST00000357798 ZC2HC1BQ5TFG8 222 aa18.41■□□□□ 0.54
NPAS3-203ENST00000357798 TAL2Q16559 108 aa18.41■□□□□ 0.54
NPAS3-203ENST00000357798 C5orf64Q2M2E5 130 aa18.4■□□□□ 0.54
NPAS3-203ENST00000357798 DPM3Q9P2X0 92 aa18.4■□□□□ 0.54
NPAS3-203ENST00000357798 IGLV2-18A0A075B6J9 118 aa18.4■□□□□ 0.54
NPAS3-203ENST00000357798 TMEM8BA6NDV4 472 aa18.4■□□□□ 0.54
NPAS3-203ENST00000357798 B9A039 149 aa18.4■□□□□ 0.54
NPAS3-203ENST00000357798 SCGB2A1O75556 95 aa18.39■□□□□ 0.53
NPAS3-203ENST00000357798 TTC9CQ8N5M4 171 aa18.39■□□□□ 0.53
NPAS3-203ENST00000357798 ONECUT1Q9UBC0 465 aa18.39■□□□□ 0.53
NPAS3-203ENST00000357798 PKDREJQ9NTG1 2253 aa18.39■□□□□ 0.53
NPAS3-203ENST00000357798 HLA-DMBP28068 263 aa18.39■□□□□ 0.53
NPAS3-203ENST00000357798 F8W1H4 67 aa18.38■□□□□ 0.53
NPAS3-203ENST00000357798 DEFB123Q8N688 67 aa18.38■□□□□ 0.53
NPAS3-203ENST00000357798 ARPC1AQ92747 370 aa18.38■□□□□ 0.53
NPAS3-203ENST00000357798 IGLL5B9A064 214 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 LYNX1G3V0Z9 82 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 LYNX1P0DP58 116 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 IGFL4Q6B9Z1 124 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 DTX2Q86UW9 622 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 LY6G5BQ8NDX9 201 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 OR11H6Q8NGC7 330 aa18.37■□□□□ 0.53
NPAS3-203ENST00000357798 GATA1P15976 413 aaPredicted RBP18.37■□□□□ 0.53
NPAS3-203ENST00000357798 PRSS47A8MTI9 375 aa18.36■□□□□ 0.53
NPAS3-203ENST00000357798 FOXI2Q6ZQN5 318 aa18.36■□□□□ 0.53
NPAS3-203ENST00000357798 ZFHX4Q86UP3 3567 aa18.36■□□□□ 0.53
NPAS3-203ENST00000357798 DYNAPQ8N1N2 210 aa18.36■□□□□ 0.53
NPAS3-203ENST00000357798 SPANXB1Q9NS25 103 aaPredicted RBP18.36■□□□□ 0.53
NPAS3-203ENST00000357798 SIGMAR1Q99720 223 aa18.35■□□□□ 0.53
NPAS3-203ENST00000357798 TMEM160Q9NX00 188 aa18.35■□□□□ 0.53
NPAS3-203ENST00000357798 RBAKDNA6NC62 111 aa18.35■□□□□ 0.53
NPAS3-203ENST00000357798 ZNF672Q499Z4 452 aaPredicted RBP18.35■□□□□ 0.53
NPAS3-203ENST00000357798 MRPL35Q9NZE8 188 aaKnown RBP18.35■□□□□ 0.53
NPAS3-203ENST00000357798 TRAV40A0A0B4J280 105 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 J3QR89 54 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 CTSGP08311 255 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 MYOZ3Q8TDC0 251 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 ZNF479Q96JC4 524 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 RP1L1Q8IWN7 2480 aaPredicted RBP18.34■□□□□ 0.53
NPAS3-203ENST00000357798 IGHV3-23P01764 117 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 ERCC8Q13216 396 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 HES1Q14469 280 aa18.34■□□□□ 0.53
NPAS3-203ENST00000357798 ZZEF1O43149 2961 aa18.33■□□□□ 0.53
NPAS3-203ENST00000357798 AZU1P20160 251 aa18.33■□□□□ 0.53
NPAS3-203ENST00000357798 NDPQ00604 133 aa18.33■□□□□ 0.53
NPAS3-203ENST00000357798 SMG1Q96Q15 3661 aaKnown RBP18.33■□□□□ 0.52
NPAS3-203ENST00000357798 LAGE3Q14657 143 aa18.33■□□□□ 0.52
NPAS3-203ENST00000357798 IL17RELQ6ZVW7 336 aa18.33■□□□□ 0.52
NPAS3-203ENST00000357798 MAPKAPK5-AS1Q8N8E1 139 aa18.33■□□□□ 0.52
NPAS3-203ENST00000357798 A0A087WX48 190 aa18.32■□□□□ 0.52
NPAS3-203ENST00000357798 C12orf74Q32Q52 190 aa18.32■□□□□ 0.52
NPAS3-203ENST00000357798 CD300EQ496F6 205 aaPredicted RBP18.32■□□□□ 0.52
NPAS3-203ENST00000357798 SH3BGRL2Q9UJC5 107 aa18.32■□□□□ 0.52
NPAS3-203ENST00000357798 PPIFP30405 207 aaKnown RBP18.31■□□□□ 0.52
NPAS3-203ENST00000357798 NRACQ8N912 160 aa18.31■□□□□ 0.52
NPAS3-203ENST00000357798 WFDC2Q14508 124 aa18.31■□□□□ 0.52
NPAS3-203ENST00000357798 PRAC2D3DTV9 90 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 CD3EP07766 207 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 PLNP26678 52 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 ODF3BA8MYP8 253 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 LINC01619G3V211 115 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 ZNF207O43670 478 aaKnown RBP18.3■□□□□ 0.52
NPAS3-203ENST00000357798 GTSF1LQ9H1H1 148 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 TSSC4Q9Y5U2 329 aaPredicted RBP18.3■□□□□ 0.52
NPAS3-203ENST00000357798 CFAP47Q6ZTR5 3102 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 IGKV3D-20A0A0C4DH25 116 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 GAGE12HA6NDE8 117 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 TRGV3P03979 118 aa18.3■□□□□ 0.52
NPAS3-203ENST00000357798 TMEM11P17152 192 aa18.29■□□□□ 0.52
NPAS3-203ENST00000357798 RAB9AP51151 201 aa18.29■□□□□ 0.52
NPAS3-203ENST00000357798 SPATA25Q9BR10 227 aa18.28■□□□□ 0.52
NPAS3-203ENST00000357798 SLC50A1Q9BRV3 221 aa18.28■□□□□ 0.52
NPAS3-203ENST00000357798 BOD1L1Q8NFC6 3051 aa18.28■□□□□ 0.52
NPAS3-203ENST00000357798 ZNF502Q8TBZ5 544 aa18.28■□□□□ 0.52
NPAS3-203ENST00000357798 NCBP2LA6PVI3 153 aaKnown RBP18.27■□□□□ 0.52
NPAS3-203ENST00000357798 KLRD1Q13241 179 aa18.27■□□□□ 0.52
NPAS3-203ENST00000357798 HIST1H4GQ99525 98 aa18.27■□□□□ 0.52
NPAS3-203ENST00000357798 TRBV7-3A0A075B6L6 115 aa18.27■□□□□ 0.51
NPAS3-203ENST00000357798 K7EMI3 77 aa18.27■□□□□ 0.51
NPAS3-203ENST00000357798 RRN3P1Q2M238 152 aa18.27■□□□□ 0.51
NPAS3-203ENST00000357798 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.27■□□□□ 0.51
NPAS3-203ENST00000357798 C11orf21Q9P2W6 132 aa18.27■□□□□ 0.51
NPAS3-203ENST00000357798 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.26■□□□□ 0.51
NPAS3-203ENST00000357798 A0A1B0GWB2 263 aa18.26■□□□□ 0.51
NPAS3-203ENST00000357798 TRAV12-1A0A0B4J245 112 aa18.26■□□□□ 0.51
NPAS3-203ENST00000357798 M0R1W7 72 aa18.26■□□□□ 0.51
NPAS3-203ENST00000357798 Q8N6K4 173 aa18.26■□□□□ 0.51
NPAS3-203ENST00000357798 H3BMG7 143 aa18.25■□□□□ 0.51
NPAS3-203ENST00000357798 IGHV4-4A0A075B6R2 117 aa18.25■□□□□ 0.51
NPAS3-203ENST00000357798 IGHV7-4-1A0A0J9YVY3 117 aa18.25■□□□□ 0.51
NPAS3-203ENST00000357798 SMAGPQ0VAQ4 97 aa18.25■□□□□ 0.51
NPAS3-203ENST00000357798 RNF182Q8N6D2 247 aa18.25■□□□□ 0.51
NPAS3-203ENST00000357798 ZFAND3Q9H8U3 227 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms