RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RNF185Q96GF1 192 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 SMAD5-AS1Q9Y6J3 95 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 FAM90A27PA6NNH2 459 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 IGHG4P01861 327 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 ZNF80P51504 273 aaPredicted RBP13.76□□□□□ -0.21
RTN4-204ENST00000357732 KIR3DS1Q14943 382 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 OR5A1Q8NGJ0 315 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 PSMG3-AS1Q96PY0 264 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 S4R3C0 116 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
RTN4-204ENST00000357732 FOXE3Q13461 319 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 VGLL1Q99990 258 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 SLC50A1Q9BRV3 221 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 ABCA1O95477 2261 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 LY6HO94772 140 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 NDPQ00604 133 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 ZNF575Q86XF7 245 aa13.75□□□□□ -0.21
RTN4-204ENST00000357732 ORM1P02763 201 aa13.74□□□□□ -0.21
RTN4-204ENST00000357732 Q8TAT8 98 aa13.74□□□□□ -0.21
RTN4-204ENST00000357732 SPTBN2O15020 2390 aa13.74□□□□□ -0.21
RTN4-204ENST00000357732 A0A0G2JLM5 398 aa13.74□□□□□ -0.21
RTN4-204ENST00000357732 ATP5LO75964 103 aa13.74□□□□□ -0.21
RTN4-204ENST00000357732 FOXC1Q12948 553 aa13.74□□□□□ -0.21
RTN4-204ENST00000357732 POLEQ07864 2286 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 NCBP2LA6PVI3 153 aaKnown RBP13.73□□□□□ -0.21
RTN4-204ENST00000357732 NBL1P41271 181 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 PRSS57Q6UWY2 283 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 LRBAP50851 2863 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 PRSS47A8MTI9 375 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 SMKR1H3BMG3 65 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 TNFRSF6BO95407 300 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 VMO1Q7Z5L0 202 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 OR2K2Q8NGT1 345 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 MRPL53Q96EL3 112 aaKnown RBP13.73□□□□□ -0.21
RTN4-204ENST00000357732 DCHS2Q6V1P9 2916 aa13.73□□□□□ -0.21
RTN4-204ENST00000357732 K7ENP7 123 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 EVI2AP22794 236 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 NMUP48645 174 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 KLRD1Q13241 179 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 ODF1Q14990 250 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 H3BUT2 72 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 LEPP41159 167 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 Q8N8P6 123 aa13.72□□□□□ -0.21
RTN4-204ENST00000357732 FAM110DQ8TAY7 271 aaPredicted RBP13.72□□□□□ -0.21
RTN4-204ENST00000357732 DKK2Q9UBU2 259 aa13.71□□□□□ -0.21
RTN4-204ENST00000357732 IGHV7-81A0A0B4J1V7 117 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 A0A1W2PPM0 123 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 TMEM11P17152 192 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 PCP2Q8IVA1 136 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 ZNF502Q8TBZ5 544 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 JMJD8Q96S16 334 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 HHLA3Q9XRX5 114 aa13.71□□□□□ -0.22
RTN4-204ENST00000357732 RELNP78509 3460 aa13.7□□□□□ -0.22
RTN4-204ENST00000357732 A0A1W2PRD5 423 aa13.7□□□□□ -0.22
RTN4-204ENST00000357732 A0A1W2PRF3 423 aa13.7□□□□□ -0.22
RTN4-204ENST00000357732 A0A1W2PRM7 423 aa13.7□□□□□ -0.22
RTN4-204ENST00000357732 BUB3O43684 328 aa13.7□□□□□ -0.22
RTN4-204ENST00000357732 IGKCP01834 107 aa13.7□□□□□ -0.22
RTN4-204ENST00000357732 GOSR1O95249 250 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 FXYD7P58549 80 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 DYNAPQ8N1N2 210 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 ZFAND3Q9H8U3 227 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 SRSF1Q07955 248 aaKnown RBP eCLIP13.69□□□□□ -0.224e-8■■□□□ 12.3
RTN4-204ENST00000357732 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 CSTL1Q9H114 145 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 MSRB1Q9NZV6 116 aa13.69□□□□□ -0.22
RTN4-204ENST00000357732 IGHV3-23P01764 117 aa13.68□□□□□ -0.22
RTN4-204ENST00000357732 SMIM13P0DJ93 91 aa13.68□□□□□ -0.22
RTN4-204ENST00000357732 DPM2O94777 84 aa13.68□□□□□ -0.22
RTN4-204ENST00000357732 FABP2P12104 132 aa13.68□□□□□ -0.22
RTN4-204ENST00000357732 CDSNQ15517 529 aa13.68□□□□□ -0.22
RTN4-204ENST00000357732 DTX2Q86UW9 622 aa13.68□□□□□ -0.22
RTN4-204ENST00000357732 IGLV2-18A0A075B6J9 118 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 IGHV4-4A0A075B6R2 117 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 PRSS1P07477 247 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 SMIM17P0DL12 118 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 HLA-DMBP28068 263 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 C11orf71Q6IPW1 123 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 NEGR1Q7Z3B1 354 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 Q8N9W7 124 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 C18orf15Q96N68 181 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 MSRB2Q9Y3D2 182 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 SPCS1Q9Y6A9 102 aa13.67□□□□□ -0.22
RTN4-204ENST00000357732 TLN1Q9Y490 2541 aaKnown RBP13.67□□□□□ -0.22
RTN4-204ENST00000357732 CSMD1Q96PZ7 3565 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 CEP295Q9C0D2 2601 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 C15orf32Q32M92 178 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 ATP6V0BQ99437 205 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 G3V4G9 280 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 MEGF9Q9H1U4 602 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 MUC6Q6W4X9 2439 aa13.66□□□□□ -0.22
RTN4-204ENST00000357732 TPRP12270 2363 aaKnown RBP13.65□□□□□ -0.22
RTN4-204ENST00000357732 CCL21O00585 134 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 TAL2Q16559 108 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 TMEM158Q8WZ71 300 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms