RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RMI2Q96E14 147 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
SCN8A-201ENST00000354534 SP7Q8TDD2 431 aaPredicted RBP6.55□□□□□ -1.36
SCN8A-201ENST00000354534 HELZP42694 1942 aaKnown RBP6.55□□□□□ -1.36
SCN8A-201ENST00000354534 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 ADAMTSL1Q8N6G6 1762 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 A6NED7 52 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 PRSS47A8MTI9 375 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 XCL1P47992 114 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 C2orf66Q6UXQ4 117 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 ZNF501Q96CX3 271 aaPredicted RBP6.54□□□□□ -1.36
SCN8A-201ENST00000354534 FAM166AQ6J272 317 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 ZNRF2Q8NHG8 242 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 NDUFC2-KCTD14E9PQ53 114 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 LYNX1G3V0Z9 82 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 LYNX1P0DP58 116 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 ZCCHC24Q8N2G6 241 aaKnown RBP6.54□□□□□ -1.36
SCN8A-201ENST00000354534 CRYGBP07316 175 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 CECR9P0C854 216 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 TMEM213A2RRL7 107 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 SEM1Q6ZVN7 128 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 ZNF503Q96F45 646 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV1-39P01597 117 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV1D-39P04432 117 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 HERVK_113P63121 156 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 DEFB125Q8N687 156 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 A0A1B0GTI1 187 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 PIP4P2Q8N4L2 257 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 WISP3O95389 354 aaPredicted RBP6.53□□□□□ -1.36
SCN8A-201ENST00000354534 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 IGF2BP2-AS1Q96M15 143 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 MED12LQ86YW9 2145 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 BDP1A6H8Y1 2624 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 NTN3O00634 580 aaPredicted RBP6.53□□□□□ -1.36
SCN8A-201ENST00000354534 CCDC168Q8NDH2 2452 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 HCFC1P51610 2035 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 IGKV1-8A0A0C4DH67 115 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 G3V4G9 280 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 IGHV4-59P01825 116 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 XCL2Q9UBD3 114 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 CUL9Q8IWT3 2517 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 TRAV23DV6A0A075B6W5 121 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 LYPD6BQ8NI32 183 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 TRGV9Q99603 122 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 UBR3Q6ZT12 1888 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 MYO9AB2RTY4 2548 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 CELA3BP08861 270 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 KLK9Q9UKQ9 250 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 COL18A1P39060 1754 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 TRAV26-1A0A087WT03 109 aa6.53□□□□□ -1.36
SCN8A-201ENST00000354534 IGHV2OR16-5A0A0B4J2B6 119 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 C17orf100A8MU93 164 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 TRBV12-3P01733 135 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 IGHV1-8P0DP01 117 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.52□□□□□ -1.37
SCN8A-201ENST00000354534 C9orf139Q6ZV77 190 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 TRBV6-7A0A0A0MS04 114 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 MRPL35Q9NZE8 188 aaKnown RBP6.52□□□□□ -1.37
SCN8A-201ENST00000354534 TRAV4A0A0B4J268 109 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 IGLL5B9A064 214 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 J3QQQ9 107 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 DYNAPQ8N1N2 210 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 Q8N8P6 123 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 LINC00479Q96M42 142 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 C20orf144Q9BQM9 153 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 NCOA6Q14686 2063 aaPredicted RBP6.52□□□□□ -1.37
SCN8A-201ENST00000354534 IGKV1OR2-108A0A075B7D4 117 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 VMO1Q7Z5L0 202 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 GFRA4Q9GZZ7 299 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 Q9HAA7 133 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 NHSL1Q5SYE7 1610 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 SHANK3Q9BYB0 1731 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 USP17L23D6RBM5 183 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 COX6A1P12074 109 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 C1orf195Q5TG92 126 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 IGLL1P15814 213 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 IGHV2-26A0A0B4J1V2 119 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 RFNGQ9Y644 331 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 FGF16O43320 207 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 FAM110AQ9BQ89 295 aa6.52□□□□□ -1.37
SCN8A-201ENST00000354534 TGFBR3LH3BV60 316 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 CXCL5P42830 114 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 MRPL51Q4U2R6 128 aaKnown RBP6.51□□□□□ -1.37
SCN8A-201ENST00000354534 SPANXB1Q9NS25 103 aaPredicted RBP6.51□□□□□ -1.37
SCN8A-201ENST00000354534 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 LGALS9BQ3B8N2 356 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 LGALS9CQ6DKI2 356 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 SIGLEC12Q96PQ1 595 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 LY96Q9Y6Y9 160 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 ANKHD1Q8IWZ3 2542 aaKnown RBP6.51□□□□□ -1.37
SCN8A-201ENST00000354534 CENPVL3A0A0U1RRI6 287 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
SCN8A-201ENST00000354534 SLC25A45Q8N413 288 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 LYPD1Q8N2G4 141 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms