RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 IFITM10A6NMD0 228 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 DEFA6Q01524 100 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 DEFB135Q30KP9 77 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
LIN54-201ENST00000340417 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 CCL18P55774 89 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 TMEM256Q8N2U0 113 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 IGLV11-55A0A075B6I3 123 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 DEFB104AQ8WTQ1 72 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
LIN54-201ENST00000340417 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 DLX4Q92988 240 aaPredicted RBP10.01□□□□□ -0.81
LIN54-201ENST00000340417 NIT2Q9NQR4 276 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 OSTCQ9NRP0 149 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 TMEM160Q9NX00 188 aa10.01□□□□□ -0.81
LIN54-201ENST00000340417 PLCE1Q9P212 2302 aa10□□□□□ -0.81
LIN54-201ENST00000340417 CKS1BP61024 79 aa10□□□□□ -0.81
LIN54-201ENST00000340417 LYRM7Q5U5X0 104 aa10□□□□□ -0.81
LIN54-201ENST00000340417 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
LIN54-201ENST00000340417 NUDT11Q96G61 164 aa10□□□□□ -0.81
LIN54-201ENST00000340417 SPTBN4Q9H254 2564 aa10□□□□□ -0.81
LIN54-201ENST00000340417 DIRC3C9JPN6 131 aa10□□□□□ -0.81
LIN54-201ENST00000340417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
LIN54-201ENST00000340417 PPBPP02775 128 aa10□□□□□ -0.81
LIN54-201ENST00000340417 VWC2Q2TAL6 325 aa10□□□□□ -0.81
LIN54-201ENST00000340417 GFI1BQ5VTD9 330 aa10□□□□□ -0.81
LIN54-201ENST00000340417 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
LIN54-201ENST00000340417 ARMS2P0C7Q2 107 aa10□□□□□ -0.81
LIN54-201ENST00000340417 OCC1Q8TAD7 63 aa10□□□□□ -0.81
LIN54-201ENST00000340417 NDUFA3O95167 84 aa10□□□□□ -0.81
LIN54-201ENST00000340417 THAP8Q8NA92 274 aa10□□□□□ -0.81
LIN54-201ENST00000340417 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
LIN54-201ENST00000340417 PGPEP1LA6NFU8 196 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 A8MWV9 139 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 LURAP1LQ8IV03 231 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 MRPS16Q9Y3D3 137 aaKnown RBP9.99□□□□□ -0.81
LIN54-201ENST00000340417 F6UB75 175 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 SS18Q15532 418 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 C1orf159Q96HA4 380 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
LIN54-201ENST00000340417 SPXQ9BT56 116 aa9.99□□□□□ -0.81
LIN54-201ENST00000340417 EML6Q6ZMW3 1958 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 F8W735 103 aaPredicted RBP9.98□□□□□ -0.81
LIN54-201ENST00000340417 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 CGB7P0DN87 165 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 Q86TA4 180 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 CHD8Q9HCK8 2581 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 MYO18BQ8IUG5 2567 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 H7C2G1 150 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 APOMO95445 188 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 IGHG4P01861 327 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 HOXA5P20719 270 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 RPL23P62829 140 aaKnown RBP9.98□□□□□ -0.81
LIN54-201ENST00000340417 DYNAPQ8N1N2 210 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 LINC01006Q8NI28 216 aa9.98□□□□□ -0.81
LIN54-201ENST00000340417 PFN1P07737 140 aaKnown RBP9.98□□□□□ -0.81
LIN54-201ENST00000340417 PARD6GQ9BYG4 376 aaPredicted RBP9.98□□□□□ -0.81
LIN54-201ENST00000340417 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 TRGC2P03986 189 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 TMEM75Q8N9X5 138 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
LIN54-201ENST00000340417 SLC25A2Q9BXI2 301 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 ATP5G1P05496 136 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 ANXA2RQ3ZCQ2 193 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 DEFB125Q8N687 156 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 OR2K2Q8NGT1 345 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
LIN54-201ENST00000340417 TMEM14CQ9P0S9 112 aa9.97□□□□□ -0.81
LIN54-201ENST00000340417 K7EMT4 169 aa9.96□□□□□ -0.81
LIN54-201ENST00000340417 ZNF414Q96IQ9 312 aa9.96□□□□□ -0.81
LIN54-201ENST00000340417 K7EIM0 57 aa9.96□□□□□ -0.81
LIN54-201ENST00000340417 ZNF114Q8NC26 417 aa9.96□□□□□ -0.81
LIN54-201ENST00000340417 C8orf49Q96NF6 230 aa9.96□□□□□ -0.81
LIN54-201ENST00000340417 FNDC4Q9H6D8 234 aaPredicted RBP9.96□□□□□ -0.81
LIN54-201ENST00000340417 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.81
LIN54-201ENST00000340417 I3L2K1 104 aa9.96□□□□□ -0.82
LIN54-201ENST00000340417 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
LIN54-201ENST00000340417 VCYO14598 125 aa9.96□□□□□ -0.82
LIN54-201ENST00000340417 PYGO2Q9BRQ0 406 aa9.96□□□□□ -0.82
LIN54-201ENST00000340417 A0A1B0GW64 132 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 IGLL5B9A064 214 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 LSM4Q9Y4Z0 139 aaKnown RBP9.95□□□□□ -0.82
LIN54-201ENST00000340417 CTSGP08311 255 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 GSN-AS1Q9NRJ2 163 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 SPRY2O43597 315 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 LINC00469Q8N7U9 141 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 ARHGAP21Q5T5U3 1957 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 TRPT1Q86TN4 253 aaKnown RBP9.95□□□□□ -0.82
LIN54-201ENST00000340417 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 DEFB4AO15263 64 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 ODF3L1Q8IXM7 274 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 IMMP2LQ96T52 175 aa9.95□□□□□ -0.82
LIN54-201ENST00000340417 TLN1Q9Y490 2541 aaKnown RBP9.94□□□□□ -0.82
LIN54-201ENST00000340417 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms