RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IGLL1P15814 213 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 PAX8Q06710 450 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
LITAF-201ENST00000339430 MCRIP2Q9BUT9 160 aaKnown RBP12.64□□□□□ -0.39
LITAF-201ENST00000339430 IGHV3OR16-10A0A075B7F0 116 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 B4DSR2 109 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 CLEC3BP05452 202 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 RHOGP84095 191 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 TMEM213A2RRL7 107 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 SCGB2A1O75556 95 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 FAM110DQ8TAY7 271 aaPredicted RBP12.63□□□□□ -0.39
LITAF-201ENST00000339430 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 SYS1-DBNDD2H3BUS1 97 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 IGHG4P01861 327 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 TMEM190Q8WZ59 177 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 PRR25Q96S07 402 aa12.63□□□□□ -0.39
LITAF-201ENST00000339430 CCDC168Q8NDH2 2452 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
LITAF-201ENST00000339430 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 Q96MF0 132 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 TP73-AS1Q9UF72 201 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 PDZD2O15018 2839 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 CLEC19AQ6UXS0 136 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 KRTAP1-3Q8IUG1 177 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
LITAF-201ENST00000339430 IGHV3-49A0A0A0MS15 119 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 ZANQ9Y493 2812 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 CENPVL3A0A0U1RRI6 287 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 NPFFO15130 113 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 LOXL1Q08397 574 aaPredicted RBP12.61□□□□□ -0.39
LITAF-201ENST00000339430 ERCC8Q13216 396 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 LAMTOR2Q9Y2Q5 125 aa12.61□□□□□ -0.39
LITAF-201ENST00000339430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.392e-11■□□□□ 8.5
LITAF-201ENST00000339430 LOC389332A0A1B0GUA5 103 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 hDV102S1A0JD36 115 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 ZNF207O43670 478 aaKnown RBP12.6□□□□□ -0.39
LITAF-201ENST00000339430 TSPOP30536 169 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 Q6AWC8 147 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 AMN1Q8IY45 258 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
LITAF-201ENST00000339430 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 PRRC2AP48634 2157 aaKnown RBP12.59□□□□□ -0.39
LITAF-201ENST00000339430 SAPCD1Q5SSQ6 148 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 STPG4Q8N801 248 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 LINC01356Q8N9X3 169 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 PRSS3P2Q8NHM4 247 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 CCDC140Q96MF4 163 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 PMCHL2Q9BQD1 86 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 D6R8Y8 96 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 CRXO43186 299 aaPredicted RBP12.59□□□□□ -0.39
LITAF-201ENST00000339430 FAM106AQ4KMX7 169 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 TMEM208Q9BTX3 173 aa12.59□□□□□ -0.39
LITAF-201ENST00000339430 A0A1B0GW15 77 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 HINT1P49773 126 aaPredicted RBP12.58□□□□□ -0.4
LITAF-201ENST00000339430 COL5A1-AS1Q5SY13 56 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 MAP1LC3CQ9BXW4 147 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 AP5S1Q9NUS5 200 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 CREBBPQ92793 2442 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 BUB3O43684 328 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 OR5AL1P0C617 328 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 IFI27P40305 119 aaPredicted RBP12.58□□□□□ -0.4
LITAF-201ENST00000339430 FA2HQ7L5A8 372 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 WFDC11Q8NEX6 87 aa12.58□□□□□ -0.4
LITAF-201ENST00000339430 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 TGFAP01135 160 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 CR1P17927 2039 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 C20orf202A1L168 122 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 CLPSL1A2RUU4 121 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 ORM1P02763 201 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 TWIST1Q15672 202 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 BRD3OSQ6XYD6 125 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
LITAF-201ENST00000339430 AVPP01185 164 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 IGHV4-38-2P0DP08 117 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 C5orf56Q8N8D9 126 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 SMKR1H3BMG3 65 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 GATA3P23771 443 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 FXYD7P58549 80 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 HSPB8Q9UJY1 196 aa12.56□□□□□ -0.4
LITAF-201ENST00000339430 MRPL51Q4U2R6 128 aaKnown RBP12.55□□□□□ -0.4
LITAF-201ENST00000339430 COX8CQ7Z4L0 72 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms