RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CAMPP49913 170 aa8.43□□□□□ -1.06
RTN3-201ENST00000338850 SAPCD1Q5SSQ6 148 aa8.43□□□□□ -1.06
RTN3-201ENST00000338850 Q6ZN92 141 aa8.43□□□□□ -1.06
RTN3-201ENST00000338850 GOLT1AQ6ZVE7 132 aa8.43□□□□□ -1.06
RTN3-201ENST00000338850 U3KQK5 164 aa8.43□□□□□ -1.06
RTN3-201ENST00000338850 ZNF785A8K8V0 405 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 LEPROTL1O95214 131 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 COX7A1P24310 79 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 ZC2HC1AQ96GY0 325 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 PGLYRP4Q96LB8 373 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 FANCD2OSQ96PS1 177 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 PMCHL2Q9BQD1 86 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
RTN3-201ENST00000338850 AAMDCQ9H7C9 122 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 NBEAL1Q6ZS30 2694 aa8.42□□□□□ -1.06
RTN3-201ENST00000338850 A0A087X0K7 114 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 GNG7O60262 68 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 CNIH1O95406 144 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 CT45A10P0DMU9 189 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 CSN1S1P47710 185 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 PRNTQ86SH4 94 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 LINC01356Q8N9X3 169 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 ARPC1AQ92747 370 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 CNFNQ9BYD5 112 aa8.41□□□□□ -1.06
RTN3-201ENST00000338850 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 OR4C46A6NHA9 309 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 F8W735 103 aaPredicted RBP8.4□□□□□ -1.06
RTN3-201ENST00000338850 IL4P05112 153 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 IGLL1P15814 213 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 LDLRAD2Q5SZI1 272 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 ASPHD1Q5U4P2 390 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 EXOC3-AS1Q8N2X6 119 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 C21orf62Q9NYP8 219 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 ONECUT1Q9UBC0 465 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 RPH3ALQ9UNE2 315 aa8.4□□□□□ -1.06
RTN3-201ENST00000338850 LOC105371242A0A075B767 164 aa8.39□□□□□ -1.07
RTN3-201ENST00000338850 HSBP1L1C9JCN9 74 aa8.39□□□□□ -1.07
RTN3-201ENST00000338850 Q56UQ5 140 aa8.39□□□□□ -1.07
RTN3-201ENST00000338850 LEMD1Q68G75 181 aa8.39□□□□□ -1.07
RTN3-201ENST00000338850 OR10AG1Q8NH19 301 aa8.39□□□□□ -1.07
RTN3-201ENST00000338850 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
RTN3-201ENST00000338850 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 B4DSR2 109 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 BMI1P35226 326 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 LCN12Q6JVE5 192 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 STPG4Q8N801 248 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 FAM110DQ8TAY7 271 aaPredicted RBP8.38□□□□□ -1.07
RTN3-201ENST00000338850 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
RTN3-201ENST00000338850 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
RTN3-201ENST00000338850 SVEP1Q4LDE5 3571 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 IGHV3-21A0A0B4J1V1 117 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 TCF21O43680 179 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 PPBPP02775 128 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 IGLC6P0CF74 106 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 LMO4P61968 165 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 C12orf54Q6X4T0 127 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 VMO1Q7Z5L0 202 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 ZNF738Q8NE65 137 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 OR1N2Q8NGR9 330 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 SLC50A1Q9BRV3 221 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 HIF1ANQ9NWT6 349 aa8.37□□□□□ -1.07
RTN3-201ENST00000338850 ANK2Q01484 3957 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 TOX4O94842 621 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 MSMBP08118 114 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 G0S2P27469 103 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 CRIP1P50238 77 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 LGALS9CQ6DKI2 356 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 FA2HQ7L5A8 372 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 PRR25Q96S07 402 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 ZNF747Q9BV97 191 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 SIRPDQ9H106 197 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 RABAC1Q9UI14 185 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 COX11Q9Y6N1 276 aa8.36□□□□□ -1.07
RTN3-201ENST00000338850 H3BTX0 84 aa8.35□□□□□ -1.07
RTN3-201ENST00000338850 APELAP0DMC3 54 aa8.35□□□□□ -1.07
RTN3-201ENST00000338850 CRIP2P52943 208 aaPredicted RBP8.35□□□□□ -1.07
RTN3-201ENST00000338850 ARF6P62330 175 aa8.35□□□□□ -1.07
RTN3-201ENST00000338850 NDPQ00604 133 aa8.35□□□□□ -1.07
RTN3-201ENST00000338850 HIST1H1AQ02539 215 aaPredicted RBP8.35□□□□□ -1.07
RTN3-201ENST00000338850 DEFB125Q8N687 156 aa8.35□□□□□ -1.07
RTN3-201ENST00000338850 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 SH2D1AO60880 128 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 BRI3O95415 125 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 CTSGP08311 255 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 NPSP0C0P6 89 aa8.34□□□□□ -1.07
RTN3-201ENST00000338850 COX8AP10176 69 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms