RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 RAB9AP51151 201 aa18.08■□□□□ 0.48
NDEL1-201ENST00000334527 ZNF575Q86XF7 245 aa18.08■□□□□ 0.48
NDEL1-201ENST00000334527 PIP4P2Q8N4L2 257 aa18.08■□□□□ 0.48
NDEL1-201ENST00000334527 CENPVL3A0A0U1RRI6 287 aa18.07■□□□□ 0.48
NDEL1-201ENST00000334527 NPFFO15130 113 aa18.07■□□□□ 0.48
NDEL1-201ENST00000334527 MPV17L2Q567V2 206 aa18.07■□□□□ 0.48
NDEL1-201ENST00000334527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.07■□□□□ 0.48
NDEL1-201ENST00000334527 COX11Q9Y6N1 276 aa18.07■□□□□ 0.48
NDEL1-201ENST00000334527 CLPSL1A2RUU4 121 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 SMKR1H3BMG3 65 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 CKS2P33552 79 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 OR8A1Q8NGG7 326 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 HIVEP3Q5T1R4 2406 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 IGHV3OR16-13A0A075B7E8 117 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 IGHV3-74A0A0B4J1X5 117 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 FABP5P3A8MUU1 101 aa18.06■□□□□ 0.48
NDEL1-201ENST00000334527 SRSF2Q01130 221 aaKnown RBP18.06■□□□□ 0.48
NDEL1-201ENST00000334527 NHLH1Q02575 133 aa18.05■□□□□ 0.48
NDEL1-201ENST00000334527 EEF1AKMT3Q96AZ1 226 aa18.05■□□□□ 0.48
NDEL1-201ENST00000334527 TCF21O43680 179 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 NPYP01303 97 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 MSRB1Q9NZV6 116 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 FXYD7P58549 80 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 IL17RELQ6ZVW7 336 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 ZNF738Q8NE65 137 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 SLC50A1Q9BRV3 221 aa18.04■□□□□ 0.48
NDEL1-201ENST00000334527 NUDT3O95989 172 aa18.03■□□□□ 0.48
NDEL1-201ENST00000334527 C5orf56Q8N8D9 126 aa18.03■□□□□ 0.48
NDEL1-201ENST00000334527 IGHV3-49A0A0A0MS15 119 aa18.03■□□□□ 0.48
NDEL1-201ENST00000334527 RBAKDNA6NC62 111 aa18.03■□□□□ 0.48
NDEL1-201ENST00000334527 ZNF207O43670 478 aaKnown RBP18.03■□□□□ 0.48
NDEL1-201ENST00000334527 PSMG3-AS1Q96PY0 264 aa18.02■□□□□ 0.48
NDEL1-201ENST00000334527 TRBV7-1A0A0A6YYK4 115 aa18.02■□□□□ 0.47
NDEL1-201ENST00000334527 TMEM219Q86XT9 240 aa18.02■□□□□ 0.47
NDEL1-201ENST00000334527 ITLN2Q8WWU7 325 aaPredicted RBP18.02■□□□□ 0.47
NDEL1-201ENST00000334527 HBDP02042 147 aa18.01■□□□□ 0.47
NDEL1-201ENST00000334527 PAX8Q06710 450 aa18.01■□□□□ 0.47
NDEL1-201ENST00000334527 LINC01559Q495D7 138 aa18.01■□□□□ 0.47
NDEL1-201ENST00000334527 METTL26Q96S19 204 aa18.01■□□□□ 0.47
NDEL1-201ENST00000334527 C19orf84I3L1E1 186 aa18.01■□□□□ 0.47
NDEL1-201ENST00000334527 CNFNQ9BYD5 112 aa18.01■□□□□ 0.47
NDEL1-201ENST00000334527 BVES-AS1Q5T3Y7 98 aa18■□□□□ 0.47
NDEL1-201ENST00000334527 RNF185Q96GF1 192 aa18■□□□□ 0.47
NDEL1-201ENST00000334527 CACNA1BQ00975 2339 aa18■□□□□ 0.47
NDEL1-201ENST00000334527 COX8AP10176 69 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 PTTG1IPP53801 180 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 PRSS57Q6UWY2 283 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 SPTBN4Q9H254 2564 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 IGHV3OR16-10A0A075B7F0 116 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 PPIFP30405 207 aaKnown RBP17.99■□□□□ 0.47
NDEL1-201ENST00000334527 UQCRFS1P47985 274 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 AGPAT4-IT1Q9H0P7 198 aa17.99■□□□□ 0.47
NDEL1-201ENST00000334527 TRAV8-2A0A0B4J237 113 aa17.98■□□□□ 0.47
NDEL1-201ENST00000334527 CCL25O15444 150 aa17.98■□□□□ 0.47
NDEL1-201ENST00000334527 ATP5G2Q06055 141 aa17.98■□□□□ 0.47
NDEL1-201ENST00000334527 C12orf54Q6X4T0 127 aa17.98■□□□□ 0.47
NDEL1-201ENST00000334527 CACNG7P62955 275 aa17.97■□□□□ 0.47
NDEL1-201ENST00000334527 HIST1H1AQ02539 215 aaPredicted RBP17.97■□□□□ 0.47
NDEL1-201ENST00000334527 LGALS9BQ3B8N2 356 aa17.97■□□□□ 0.47
NDEL1-201ENST00000334527 LGALS9CQ6DKI2 356 aa17.97■□□□□ 0.47
NDEL1-201ENST00000334527 C8orf86Q6ZUL3 223 aa17.97■□□□□ 0.47
NDEL1-201ENST00000334527 LINC00527Q9UJ94 153 aa17.97■□□□□ 0.47
NDEL1-201ENST00000334527 AKAP6Q13023 2319 aa17.97■□□□□ 0.47
NDEL1-201ENST00000334527 UBE2V1Q13404 147 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 TMEM78Q5T7P6 136 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 MAP1LC3AQ9H492 121 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 MOB4Q9Y3A3 225 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 TRAV41A0A0B4J266 112 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 IGKV3D-20A0A0C4DH25 116 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 GAS8-AS1O95177 125 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 PPBPP02775 128 aa17.96■□□□□ 0.47
NDEL1-201ENST00000334527 SNAI2O43623 268 aa17.95■□□□□ 0.46
NDEL1-201ENST00000334527 IGHV4-39P01824 125 aa17.95■□□□□ 0.46
NDEL1-201ENST00000334527 IFI27L1Q96BM0 104 aa17.95■□□□□ 0.46
NDEL1-201ENST00000334527 C11orf21Q9P2W6 132 aa17.95■□□□□ 0.46
NDEL1-201ENST00000334527 ANKRD39Q53RE8 183 aa17.95■□□□□ 0.46
NDEL1-201ENST00000334527 U3KQE9 123 aa17.95■□□□□ 0.46
NDEL1-201ENST00000334527 MRPL53Q96EL3 112 aaKnown RBP17.94■□□□□ 0.46
NDEL1-201ENST00000334527 SFTPCP11686 197 aa17.94■□□□□ 0.46
NDEL1-201ENST00000334527 GNLYP22749 145 aa17.94■□□□□ 0.46
NDEL1-201ENST00000334527 C2orf91Q6ZV80 131 aa17.94■□□□□ 0.46
NDEL1-201ENST00000334527 ITPR1Q14643 2758 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 CHD8Q9HCK8 2581 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 TAX1BP3O14907 124 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 FOXE3Q13461 319 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 DPF1Q92782 380 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 EVI2AP22794 236 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 BRD3OSQ6XYD6 125 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 DEFB125Q8N687 156 aa17.93■□□□□ 0.46
NDEL1-201ENST00000334527 NCOR2Q9Y618 2525 aa17.92■□□□□ 0.46
NDEL1-201ENST00000334527 TNFRSF6BO95407 300 aa17.92■□□□□ 0.46
NDEL1-201ENST00000334527 C19orf54Q5BKX5 351 aa17.92■□□□□ 0.46
NDEL1-201ENST00000334527 WFDC3Q8IUB2 231 aa17.92■□□□□ 0.46
NDEL1-201ENST00000334527 IGHV1-69DA0A0B4J2H0 117 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 FAM223BA6NKX1 122 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 IGHV1-69P01742 117 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 TRGV3P03979 118 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 ERASQ7Z444 233 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 FAM223AQ8IWN6 122 aa17.91■□□□□ 0.46
NDEL1-201ENST00000334527 PIFOQ8TCI5 191 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms