RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGKV1-12A0A0C4DH73 117 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGKV1D-12P01611 117 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 SMRP1Q8NCR6 262 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TRAV13-2A0A0B4J235 113 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 NRN1LQ496H8 165 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGHV2-5P01817 119 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 SPSB3Q6PJ21 355 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGKV1-27A0A075B6S5 117 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 CRYGCP07315 174 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 LINC00114Q6XXX2 140 aa10.35□□□□□ -0.75
RAB11FIP1-202ENST00000330843 SEC61GP60059 68 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 DEFB121Q5J5C9 76 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 FOXI2Q6ZQN5 318 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 METRNQ9UJH8 293 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 UNQ6494/PRO21346Q6UXR6 183 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 Q86TA4 180 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 DKK2Q9UBU2 259 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 EFNA4P52798 201 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGFBPL1Q8WX77 278 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 LINC00473A8K010 186 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 RNF144BQ7Z419 303 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 MRPL35Q9NZE8 188 aaKnown RBP10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 CACNA1BQ00975 2339 aa10.34□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TRBV19A0A075B6N1 114 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 MP68P56378 58 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 EIF4EBP2Q13542 120 aaPredicted RBP10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 NCOA6Q14686 2063 aaPredicted RBP10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 IGHV1-3A0A0C4DH29 117 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 TRBV7-1A0A0A6YYK4 115 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 C15orf62A8K5M9 175 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 A0A0G2JRQ6 117 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 J3QW42 95 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CRYGBP07316 175 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 SAP25Q8TEE9 199 aa10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 BRCA1P38398 1863 aaKnown RBP10.33□□□□□ -0.76
RAB11FIP1-202ENST00000330843 I3L3M4 83 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LY96Q9Y6Y9 160 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LHFPL1Q86WI0 220 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 FOXF2Q12947 444 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 RHODO00212 210 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 EFNA2O43921 213 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 SPINK13Q1W4C9 94 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LYL1P12980 280 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 MST1LQ2TV78 715 aa10.32□□□□□ -0.76
RAB11FIP1-202ENST00000330843 SORL1Q92673 2214 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 A0A096LPF7 62 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 NDUFC2-KCTD14E9PQ53 114 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LGALS9BQ3B8N2 356 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LGALS9CQ6DKI2 356 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 PSPNO60542 156 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 Q8N8P6 123 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 PROP1O75360 226 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 UCNP55089 124 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 Q71RC1 249 aaPredicted RBP10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 DEFB125Q8N687 156 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
RAB11FIP1-202ENST00000330843 H0YJW9 148 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 FOXI1Q12951 378 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 MESP1Q9BRJ9 268 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CLPSP04118 112 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 BRD3OSQ6XYD6 125 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 TMEM75Q8N9X5 138 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 IGHV1-46P01743 117 aa10.3□□□□□ -0.76
RAB11FIP1-202ENST00000330843 TRBV25-1A0A075B6N4 114 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 IGLV3-21P80748 117 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CD177Q8N6Q3 437 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 PRSS46E5RG02 174 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CR1LQ2VPA4 569 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 SPRR3Q9UBC9 169 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 C5orf63A6NC05 138 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CFHR4Q92496 578 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CGB3P0DN86 165 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 IGHV1-8P0DP01 117 aa10.29□□□□□ -0.76
RAB11FIP1-202ENST00000330843 IFI6P09912 130 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 SMIM27A0A1W2PRY6 76 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CFC1BP0CG36 223 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 CFC1P0CG37 223 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LRRC37A2A6NM11 1700 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 LRRC37AA6NMS7 1700 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 PFN1P07737 140 aaKnown RBP10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 FAM166AQ6J272 317 aa10.28□□□□□ -0.76
RAB11FIP1-202ENST00000330843 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms