RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 COMMD9Q9P000 198 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 CACFD1Q9UGQ2 172 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 NAGKQ9UJ70 344 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 TRAPPC2LQ9UL33 140 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 PAIP2BQ9ULR5 123 aaKnown RBP1.86□□□□□ -2.11
SKP1-201ENST00000328392 RBM7Q9Y580 266 aaKnown RBP1.86□□□□□ -2.11
SKP1-201ENST00000328392 FRYQ5TBA9 3013 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 LRRK2Q5S007 2527 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 ATMQ13315 3056 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 DSCAMO60469 2012 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 TNCP24821 2201 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 DYSFO75923 2080 aa1.86□□□□□ -2.11
SKP1-201ENST00000328392 PTPN13Q12923 2485 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 CSPG4Q6UVK1 2322 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 YLPM1P49750 1951 aaKnown RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 USP9YO00507 2555 aaPredicted RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 CREBBPQ92793 2442 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 TRGV10A0A0A0MS01 117 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 TRBV6-7A0A0A0MS04 114 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 TRAV8-2A0A0B4J237 113 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 A0A0D9SG52 128 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 DUXBA0A1W2PPF3 345 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 hADV38S2A0JD32 116 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 ODAMA1E959 279 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 OR5H14A6NHG9 310 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 CRYM-AS1A6NIL9 109 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 HMSDA8MTL9 139 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 GPR31O00270 319 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 SDCBPO00560 298 aaPredicted RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 ITGB1BP1O14713 200 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 ZNF737O75373 536 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 NDUFS6O75380 124 aaKnown RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 BRI3O95415 125 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 PPYP01298 95 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 CXCL3P19876 107 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 NFYAP23511 347 aaPredicted RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 GABRA2P47869 451 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 PIGPP57054 158 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 EIF5AP63241 154 aaKnown RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 HLA-DRB3P79483 266 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 CCL8P80075 99 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 BAXQ07812 192 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 PPP1R1AQ13522 171 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 SMCO1Q147U7 214 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 HMGN3Q15651 99 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 NDUFA5Q16718 116 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 AADACL3Q5VUY0 350 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 TEX36Q5VZQ5 186 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 ZNF826PQ6ZT77 177 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 FAM19A3Q7Z5A8 133 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 LRP11Q86VZ4 500 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 MUC15Q8N387 334 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 LY6G5BQ8NDX9 201 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 ANGPTL6Q8NI99 470 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 MRPL30Q8TCC3 161 aaKnown RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 ABHD14BQ96IU4 210 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 PDCD10Q9BUL8 212 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 NMES1Q9C002 83 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 METTL8Q9H825 291 aaKnown RBP1.85□□□□□ -2.11
SKP1-201ENST00000328392 TAF9BQ9HBM6 251 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 SLC2A9Q9NRM0 540 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 CBLN4Q9NTU7 201 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 TMEM106BQ9NUM4 274 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 KAAG1Q9UBP8 84 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 ADGRG4Q8IZF6 3080 aa1.85□□□□□ -2.11
SKP1-201ENST00000328392 ZNF462Q96JM2 2506 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 USP24Q9UPU5 2620 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 IGHV2-26A0A0B4J1V2 119 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 IGHV1-69-2A0A0G2JMI3 117 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 C3orf85A0A1B0GTC6 90 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 DEFB108AA8MXU0 73 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 H0Y980 276 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 NDUFB3O43676 98 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 YPEL1O60688 119 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 PGLYRP1O75594 196 aaPredicted RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 CDS2O95674 445 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 CA2P00918 260 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 IFNA7P01567 189 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 HBZP02008 142 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 SCTP09683 121 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 SLC25A4P12235 298 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 SLC25A6P12236 298 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 PVALBP20472 110 aaPredicted RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 PSMB6P28072 239 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 AP2S1P53680 142 aaPredicted RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 EDDM3BP56851 147 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 H2BFSP57053 126 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TMEM33P57088 247 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 FXYD4P59646 89 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 RAB2AP61019 212 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 SUPT4H1P63272 117 aaKnown RBP1.84□□□□□ -2.11
SKP1-201ENST00000328392 DEFA6Q01524 100 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 CD164Q04900 197 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 TFF3Q07654 80 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 AESQ08117 197 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 CATR1Q13166 79 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 OR2F1Q13607 317 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 RAB31Q13636 194 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 ZNF345Q14585 488 aa1.84□□□□□ -2.11
SKP1-201ENST00000328392 EIF5AL1Q6IS14 154 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms