RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 K7EMT4 169 aa14.21□□□□□ -0.13
EXOSC3-201ENST00000327304 PHOX2AO14813 284 aa14.21□□□□□ -0.13
EXOSC3-201ENST00000327304 PRNTQ86SH4 94 aa14.21□□□□□ -0.13
EXOSC3-201ENST00000327304 GRAMD2BQ96HH9 432 aa14.21□□□□□ -0.13
EXOSC3-201ENST00000327304 SMIM27A0A1W2PRY6 76 aa14.2□□□□□ -0.14
EXOSC3-201ENST00000327304 RPL19P84098 196 aaKnown RBP14.2□□□□□ -0.14
EXOSC3-201ENST00000327304 PRR27Q6MZM9 219 aa14.2□□□□□ -0.14
EXOSC3-201ENST00000327304 CLEC5AQ9NY25 188 aa14.2□□□□□ -0.14
EXOSC3-201ENST00000327304 IGHV7-4-1A0A0J9YVY3 117 aa14.2□□□□□ -0.14
EXOSC3-201ENST00000327304 C19orf71A6NCJ1 209 aa14.2□□□□□ -0.14
EXOSC3-201ENST00000327304 VWFP04275 2813 aa14.19□□□□□ -0.14
EXOSC3-201ENST00000327304 C5orf52A6NGY3 159 aa14.19□□□□□ -0.14
EXOSC3-201ENST00000327304 CHEK1O14757 476 aa14.19□□□□□ -0.14
EXOSC3-201ENST00000327304 OR9G4Q8NGQ1 327 aa14.19□□□□□ -0.14
EXOSC3-201ENST00000327304 MRPL53Q96EL3 112 aaKnown RBP14.19□□□□□ -0.14
EXOSC3-201ENST00000327304 C2orf70A6NJV1 201 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 CT83Q5H943 113 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 FRZBQ92765 325 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 SMPXQ9UHP9 88 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 SELENOKQ9Y6D0 94 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BKO60814 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 PF4P02776 101 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BJP06899 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BOP23527 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BBP33778 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BDP58876 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BCP62807 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST2H2BEQ16778 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 ACTL10Q5JWF8 245 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 LCN12Q6JVE5 192 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 ADAMTSL5Q6ZMM2 481 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BHQ93079 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 DAZAP1Q96EP5 407 aaKnown RBP14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BNQ99877 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 HIST1H2BMQ99879 126 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 RHPN1-AS1Q9BWJ2 59 aa14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 SAV1Q9H4B6 383 aaPredicted RBP14.18□□□□□ -0.14
EXOSC3-201ENST00000327304 RBAKDNA6NC62 111 aa14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 OVOL1O14753 267 aa14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 TRGC1P0CF51 173 aa14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 SNRPEP62304 92 aaKnown RBP14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 SHISA2Q6UWI4 295 aa14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 LINC00322Q6ZN03 302 aaPredicted RBP14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 MDFIQ99750 246 aa14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 PEMTQ9UBM1 199 aa14.17□□□□□ -0.14
EXOSC3-201ENST00000327304 NPIPB6E9PJ23 425 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 P01737 135 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 CBLN1P23435 193 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 COX19Q49B96 90 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 SAPCD1Q5SSQ6 148 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 COX8CQ7Z4L0 72 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 GBGT1Q8N5D6 347 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 LINC00482Q8N8I6 264 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 OR4B1Q8NGF8 309 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 TSKUQ8WUA8 353 aa14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 RPP21Q9H633 154 aaKnown RBP14.16□□□□□ -0.14
EXOSC3-201ENST00000327304 IZUMO1RA6ND01 250 aa14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 CSN3P07498 182 aa14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 HLA-DMBP28068 263 aa14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 IGKV2-40A0A087WW87 121 aaPredicted RBP14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 TRAV8-2A0A0B4J237 113 aa14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 UBE2CO00762 179 aa14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 IGKV2D-40P01614 121 aaPredicted RBP14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 IGFL4Q6B9Z1 124 aa14.15□□□□□ -0.14
EXOSC3-201ENST00000327304 A8MWL6 223 aa14.14□□□□□ -0.15
EXOSC3-201ENST00000327304 CA1P00915 261 aaPredicted RBP14.14□□□□□ -0.15
EXOSC3-201ENST00000327304 ZC2HC1AQ96GY0 325 aa14.14□□□□□ -0.15
EXOSC3-201ENST00000327304 NAT8BQ9UHF3 227 aa14.14□□□□□ -0.15
EXOSC3-201ENST00000327304 TRAPPC1Q9Y5R8 145 aa14.14□□□□□ -0.15
EXOSC3-201ENST00000327304 FAM231BA6NCW3 169 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 ZNF705FA8MVS1 300 aaPredicted RBP14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 FABP9Q0Z7S8 132 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 SPATA3Q8NHX4 192 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 GFRA4Q9GZZ7 299 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 BMI1P35226 326 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 TCL1AP56279 114 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 PRR25Q96S07 402 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 GNB1LQ9BYB4 327 aa14.13□□□□□ -0.15
EXOSC3-201ENST00000327304 ANK2Q01484 3957 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 CT45A10P0DMU9 189 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 NDUFA6P56556 154 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 WDR73Q6P4I2 378 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 RASL11AQ6T310 242 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 RNF182Q8N6D2 247 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 C16orf92Q96LL3 132 aa14.12□□□□□ -0.15
EXOSC3-201ENST00000327304 MT-ND6P03923 174 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 RIPPLY3P57055 190 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 NUP35Q8NFH5 326 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 NEU1Q99519 415 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 VGLL1Q99990 258 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 M0QZ24 198 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 SOCS3O14543 225 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 HOXA5P20719 270 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 TCF24Q7RTU0 167 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 NDFIP1Q9BT67 221 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 NRN1Q9NPD7 142 aa14.11□□□□□ -0.15
EXOSC3-201ENST00000327304 PRAC2D3DTV9 90 aa14.1□□□□□ -0.15
EXOSC3-201ENST00000327304 CRIP1P50238 77 aa14.1□□□□□ -0.15
EXOSC3-201ENST00000327304 C8orf49Q96NF6 230 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms