RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 SPRY2O43597 315 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 NDUFA3O95167 84 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 RBPJQ06330 500 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 TRBV25-1A0A075B6N4 114 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 WI2-2373I1.2A0A1W2PRP0 233 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 TMEM8BA6NDV4 472 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 TIMM23O14925 209 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 LY6HO94772 140 aa11.19□□□□□ -0.62
CHRNA3-201ENST00000326828 Q6AWC8 147 aa11.19□□□□□ -0.62
CHRNA3-201ENST00000326828 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
CHRNA3-201ENST00000326828 A0A1B0GW15 77 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 C16orf97H3BN30 126 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 BUB1B-PAK6H3BSN5 160 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 IGKCP01834 107 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 INSL3P51460 131 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 PRR25Q96S07 402 aa11.18□□□□□ -0.62
CHRNA3-201ENST00000326828 TNFRSF6BO95407 300 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 ODF1Q14990 250 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 MAPKAPK5-AS1Q8N8E1 139 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 PRO3102Q9H379 93 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 CIDEAO60543 219 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 EFNA4P52798 201 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 DLX6P56179 175 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 ATP5G2Q06055 141 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 LINC00311Q8N616 119 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 SIGMAR1Q99720 223 aa11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
CHRNA3-201ENST00000326828 KLRD1Q13241 179 aa11.16□□□□□ -0.62
CHRNA3-201ENST00000326828 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
CHRNA3-201ENST00000326828 SPOCK3Q9BQ16 436 aa11.16□□□□□ -0.62
CHRNA3-201ENST00000326828 RNASE6Q93091 150 aaKnown RBP11.16□□□□□ -0.62
CHRNA3-201ENST00000326828 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
CHRNA3-201ENST00000326828 CRYGBP07316 175 aa11.16□□□□□ -0.62
CHRNA3-201ENST00000326828 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
CHRNA3-201ENST00000326828 TRGV3P03979 118 aa11.15□□□□□ -0.62
CHRNA3-201ENST00000326828 Q6ZQT7 251 aa11.15□□□□□ -0.62
CHRNA3-201ENST00000326828 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
CHRNA3-201ENST00000326828 DPF1Q92782 380 aa11.15□□□□□ -0.62
CHRNA3-201ENST00000326828 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 SIVA1O15304 175 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 RALYQ9UKM9 306 aaKnown RBP11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 U3KQK5 164 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 DPM2O94777 84 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 Q9UFV3 132 aa11.14□□□□□ -0.63
CHRNA3-201ENST00000326828 TGFAP01135 160 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 PAX8Q06710 450 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 CEND1Q8N111 149 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 THBDP07204 575 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 PVRIGQ6DKI7 326 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 CYSLTR1Q9Y271 337 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 IGLL5B9A064 214 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 DYNAPQ8N1N2 210 aa11.13□□□□□ -0.63
CHRNA3-201ENST00000326828 ATRXP46100 2492 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 COL6A6A6NMZ7 2263 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 NUP37Q8NFH4 326 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 PRRG2O14669 202 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 BMI1P35226 326 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 ASCL5Q7RTU5 278 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 LYPD1Q8N2G4 141 aa11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
CHRNA3-201ENST00000326828 CELSR1Q9NYQ6 3014 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 MFAP4P55083 255 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 MYOZ3Q8TDC0 251 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 C21orf62Q9NYP8 219 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 E7EQL1 145 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 C12orf74Q32Q52 190 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 CFHR4Q92496 578 aa11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 SPANXB1Q9NS25 103 aaPredicted RBP11.11□□□□□ -0.63
CHRNA3-201ENST00000326828 NBR2O15453 112 aa11.1□□□□□ -0.63
CHRNA3-201ENST00000326828 CD300EQ496F6 205 aaPredicted RBP11.1□□□□□ -0.63
CHRNA3-201ENST00000326828 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
CHRNA3-201ENST00000326828 RPL7P18124 248 aaKnown RBP11.1□□□□□ -0.63
CHRNA3-201ENST00000326828 NDPQ00604 133 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms