RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SPRY2O43597 315 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 ZNF80P51504 273 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 SORL1Q92673 2214 aa10.08□□□□□ -0.8
HMGCS1-201ENST00000325110 H3BUT2 72 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 GOSR1O95249 250 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 SFTPCP11686 197 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 GCSHP23434 173 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 DEFB104AQ8WTQ1 72 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 GAGE10A6NGK3 116 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 PRAC2D3DTV9 90 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 LEPP41159 167 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 TMEM97Q5BJF2 176 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 USP9YO00507 2555 aaPredicted RBP10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 IGLV11-55A0A075B6I3 123 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 FBLL1A6NHQ2 334 aaKnown RBP10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 S100A7P31151 101 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 SPANXN1Q5VSR9 72 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 TTTY13Q9BZ97 58 aa10.07□□□□□ -0.8
HMGCS1-201ENST00000325110 A0A1B0GW15 77 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 K7ENP7 123 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 TAX1BP3O14907 124 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 FOXE3Q13461 319 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 IL17RELQ6ZVW7 336 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 A1L4Q6 167 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 CFHR4Q92496 578 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 CTSGP08311 255 aa10.06□□□□□ -0.8
HMGCS1-201ENST00000325110 LY6LH3BQJ8 138 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 ATP6V0E1O15342 81 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 S100A4P26447 101 aaKnown RBP10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 PDE6HQ13956 83 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 FOXC2Q99958 501 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 WI2-2373I1.2A0A1W2PRP0 233 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 COX8AP10176 69 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 PCP2Q8IVA1 136 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 TMEM160Q9NX00 188 aa10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 PEF1Q9UBV8 284 aaKnown RBP10.05□□□□□ -0.8
HMGCS1-201ENST00000325110 TRAV8-6A0A0B4J262 113 aa10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 TRAV26-2A0A0B4J265 109 aa10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 ZFP36P26651 326 aaKnown RBP10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 IGHV2-70DA0A0C4DH43 119 aa10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 OR11H6Q8NGC7 330 aa10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 LY6EQ16553 131 aa10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
HMGCS1-201ENST00000325110 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 A6NDN8 102 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 M0R381 172 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 SAA4P35542 130 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 DEFB125Q8N687 156 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 IGHV3-11P01762 117 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 RPS20P60866 119 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 GLMPQ8WWB7 406 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 LINC01548A6NM66 108 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 M0R1W7 72 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 GTSCR1Q86UQ5 136 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 METTL26Q96S19 204 aa10.03□□□□□ -0.8
HMGCS1-201ENST00000325110 K7EMI3 77 aa10.02□□□□□ -0.8
HMGCS1-201ENST00000325110 NDUFA3O95167 84 aa10.02□□□□□ -0.8
HMGCS1-201ENST00000325110 LY6DQ14210 128 aa10.02□□□□□ -0.8
HMGCS1-201ENST00000325110 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.81
HMGCS1-201ENST00000325110 NPBQ8NG41 125 aa10.02□□□□□ -0.81
HMGCS1-201ENST00000325110 H3BVH4 76 aa10.02□□□□□ -0.81
HMGCS1-201ENST00000325110 CD5LO43866 347 aa10.02□□□□□ -0.81
HMGCS1-201ENST00000325110 DEFB1P60022 68 aa10.02□□□□□ -0.81
HMGCS1-201ENST00000325110 TMEM158Q8WZ71 300 aa10.02□□□□□ -0.81
HMGCS1-201ENST00000325110 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 MRPS12O15235 138 aaKnown RBP10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 MGPP08493 103 aa10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 SCGB2A2Q13296 93 aa10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 BPESC1Q9GZL8 116 aa10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
HMGCS1-201ENST00000325110 F8W735 103 aaPredicted RBP10□□□□□ -0.81
HMGCS1-201ENST00000325110 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
HMGCS1-201ENST00000325110 ADORA2A-AS1P86434 159 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 KIR3DS1Q14943 382 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 LY6G5BQ8NDX9 201 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 PPP1R14DQ9NXH3 145 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 K7EP13 123 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 RPL24P83731 157 aaKnown RBP10□□□□□ -0.81
HMGCS1-201ENST00000325110 CENPEQ02224 2701 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 A0A096LNJ9 63 aa10□□□□□ -0.81
HMGCS1-201ENST00000325110 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
HMGCS1-201ENST00000325110 TRGV3P03979 118 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 SRD5A1P18405 259 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 KLRB1Q12918 225 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 Q6ZQT7 251 aa9.99□□□□□ -0.81
HMGCS1-201ENST00000325110 GTF2H5Q6ZYL4 71 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms