RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TWIST1Q15672 202 aa17.22■□□□□ 0.35
PNKP-201ENST00000322344 PIFOQ8TCI5 191 aa17.22■□□□□ 0.35
PNKP-201ENST00000322344 C10orf105Q8TEF2 133 aa17.22■□□□□ 0.35
PNKP-201ENST00000322344 CCL19Q99731 98 aa17.22■□□□□ 0.35
PNKP-201ENST00000322344 IGHV4-61A0A0C4DH41 118 aa17.21■□□□□ 0.35
PNKP-201ENST00000322344 ZNF747Q9BV97 191 aa17.21■□□□□ 0.35
PNKP-201ENST00000322344 IGHV3-66A0A0C4DH42 116 aa17.21■□□□□ 0.35
PNKP-201ENST00000322344 LINC01545Q5VT33 79 aa17.21■□□□□ 0.35
PNKP-201ENST00000322344 RNF182Q8N6D2 247 aa17.21■□□□□ 0.35
PNKP-201ENST00000322344 SIGLEC8Q9NYZ4 499 aa17.21■□□□□ 0.35
PNKP-201ENST00000322344 WNK2Q9Y3S1 2297 aa17.21■□□□□ 0.34
PNKP-201ENST00000322344 IGHV3OR16-10A0A075B7F0 116 aa17.2■□□□□ 0.34
PNKP-201ENST00000322344 G0S2P27469 103 aa17.2■□□□□ 0.34
PNKP-201ENST00000322344 IFI27P40305 119 aaPredicted RBP17.2■□□□□ 0.34
PNKP-201ENST00000322344 HIST1H1AQ02539 215 aaPredicted RBP17.2■□□□□ 0.34
PNKP-201ENST00000322344 TRAV40A0A0B4J280 105 aa17.2■□□□□ 0.34
PNKP-201ENST00000322344 GAGE1Q13065 139 aa17.2■□□□□ 0.34
PNKP-201ENST00000322344 ZNF575Q86XF7 245 aa17.2■□□□□ 0.34
PNKP-201ENST00000322344 MS4A6AQ9H2W1 248 aa17.2■□□□□ 0.34
PNKP-201ENST00000322344 TRAV8-2A0A0B4J237 113 aa17.19■□□□□ 0.34
PNKP-201ENST00000322344 C8orf86Q6ZUL3 223 aa17.19■□□□□ 0.34
PNKP-201ENST00000322344 PSMG3-AS1Q96PY0 264 aa17.19■□□□□ 0.34
PNKP-201ENST00000322344 SPTBN1Q01082 2364 aaKnown RBP17.19■□□□□ 0.34
PNKP-201ENST00000322344 BRI3O95415 125 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 TRGV3P03979 118 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 IGF1P05019 195 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 CKS2P33552 79 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 TMEM78Q5T7P6 136 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 CLEC2AQ6UVW9 174 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 AGPAT4-IT1Q9H0P7 198 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 BRD3OSQ6XYD6 125 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 IL17RELQ6ZVW7 336 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 TMEM208Q9BTX3 173 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 PPP1R14DQ9NXH3 145 aa17.18■□□□□ 0.34
PNKP-201ENST00000322344 MUC21A0A0G2JKD1 596 aa17.17■□□□□ 0.34
PNKP-201ENST00000322344 MUC21A0A140T8X8 626 aa17.17■□□□□ 0.34
PNKP-201ENST00000322344 H3BUA1 57 aa17.17■□□□□ 0.34
PNKP-201ENST00000322344 DLEU1O43261 78 aa17.17■□□□□ 0.34
PNKP-201ENST00000322344 PPBPP02775 128 aa17.17■□□□□ 0.34
PNKP-201ENST00000322344 MUC21Q5SSG8 566 aa17.17■□□□□ 0.34
PNKP-201ENST00000322344 IGHV3OR16-13A0A075B7E8 117 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 IGHV3-74A0A0B4J1X5 117 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 LOC389332A0A1B0GUA5 103 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 hDV102S1A0JD36 115 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 ZNF207O43670 478 aaKnown RBP17.16■□□□□ 0.34
PNKP-201ENST00000322344 C9orf47Q6ZRZ4 202 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 STPG4Q8N801 248 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 TIMM8BQ9Y5J9 83 aaPredicted RBP17.16■□□□□ 0.34
PNKP-201ENST00000322344 ARL3P36405 182 aa17.16■□□□□ 0.34
PNKP-201ENST00000322344 A0A096LNJ9 63 aa17.14■□□□□ 0.34
PNKP-201ENST00000322344 IGHV3-49A0A0A0MS15 119 aa17.14■□□□□ 0.34
PNKP-201ENST00000322344 C9orf139Q6ZV77 190 aa17.14■□□□□ 0.34
PNKP-201ENST00000322344 GLMPQ8WWB7 406 aa17.14■□□□□ 0.34
PNKP-201ENST00000322344 TFPI2P48307 235 aa17.14■□□□□ 0.33
PNKP-201ENST00000322344 SLC25A34Q6PIV7 304 aa17.14■□□□□ 0.33
PNKP-201ENST00000322344 USMG5Q96IX5 58 aa17.14■□□□□ 0.33
PNKP-201ENST00000322344 LINC00527Q9UJ94 153 aa17.14■□□□□ 0.33
PNKP-201ENST00000322344 A6NDX4 124 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 H0Y8G0 127 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 NDUFA4O00483 81 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 NPYP01303 97 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 IGHG2P01859 326 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 HBDP02042 147 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 HINT1P49773 126 aaPredicted RBP17.13■□□□□ 0.33
PNKP-201ENST00000322344 ATP5J2P56134 94 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 FAM106AQ4KMX7 169 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 RNF185Q96GF1 192 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 IGHV4-38-2P0DP08 117 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 LOXL1Q08397 574 aaPredicted RBP17.13■□□□□ 0.33
PNKP-201ENST00000322344 C16orf92Q96LL3 132 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 NPFFR1Q9GZQ6 430 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 SCRT2Q9NQ03 307 aa17.13■□□□□ 0.33
PNKP-201ENST00000322344 TCF21O43680 179 aa17.12■□□□□ 0.33
PNKP-201ENST00000322344 MAP1LC3AQ9H492 121 aa17.12■□□□□ 0.33
PNKP-201ENST00000322344 LENEPQ9Y5L5 61 aa17.12■□□□□ 0.33
PNKP-201ENST00000322344 SPTBN4Q9H254 2564 aa17.12■□□□□ 0.33
PNKP-201ENST00000322344 IGKV3D-20A0A0C4DH25 116 aa17.11■□□□□ 0.33
PNKP-201ENST00000322344 PPIFP30405 207 aaKnown RBP17.11■□□□□ 0.33
PNKP-201ENST00000322344 MSRB1Q9NZV6 116 aa17.11■□□□□ 0.33
PNKP-201ENST00000322344 MED13LQ71F56 2210 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 TMEM8BA6NDV4 472 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 SMKR1H3BMG3 65 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 MSMBP08118 114 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 LGALS9BQ3B8N2 356 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 LGALS9CQ6DKI2 356 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 MCRIP2Q9BUT9 160 aaKnown RBP17.1■□□□□ 0.33
PNKP-201ENST00000322344 GOLT1BQ9Y3E0 138 aa17.1■□□□□ 0.33
PNKP-201ENST00000322344 IGHV4-30-2A0A087WSY4 118 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 LINC01546A6NGU7 62 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 H3BUX3 64 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 LY6EQ16553 131 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 DPF1Q92782 380 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 NCR2O95944 276 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 PRSS57Q6UWY2 283 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 OR8A1Q8NGG7 326 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 PMCHL2Q9BQD1 86 aa17.09■□□□□ 0.33
PNKP-201ENST00000322344 C11orf21Q9P2W6 132 aa17.08■□□□□ 0.33
PNKP-201ENST00000322344 ZNF124Q15973 351 aa17.08■□□□□ 0.32
PNKP-201ENST00000322344 NXT2Q9NPJ8 142 aaKnown RBP17.08■□□□□ 0.32
PNKP-201ENST00000322344 SMIM15Q7Z3B0 74 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms