RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
ATG4C-201ENST00000317868 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
ATG4C-201ENST00000317868 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
ATG4C-201ENST00000317868 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 CSN3P07498 182 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 ORMDL3Q8N138 153 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 IFI27P40305 119 aaPredicted RBP10.59□□□□□ -0.71
ATG4C-201ENST00000317868 FAM106AQ4KMX7 169 aa10.59□□□□□ -0.71
ATG4C-201ENST00000317868 FABP5P3A8MUU1 101 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 ZNF25P17030 456 aaPredicted RBP10.58□□□□□ -0.72
ATG4C-201ENST00000317868 ERCC8Q13216 396 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 RNF182Q8N6D2 247 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 IGF1P05019 195 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 LOXL1Q08397 574 aaPredicted RBP10.58□□□□□ -0.72
ATG4C-201ENST00000317868 OR10AG1Q8NH19 301 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 C10orf105Q8TEF2 133 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 HIF1ANQ9NWT6 349 aa10.58□□□□□ -0.72
ATG4C-201ENST00000317868 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV4-61A0A0C4DH41 118 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 CELSR1Q9NYQ6 3014 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 C9orf47Q6ZRZ4 202 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 IL17RELQ6ZVW7 336 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 FA2HQ7L5A8 372 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 TMEM219Q86XT9 240 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 METTL26Q96S19 204 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 hDV102S1A0JD36 115 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 TFPI2P48307 235 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 ATP5G2Q06055 141 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 BATFQ16520 125 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 NCOR2Q9Y618 2525 aa10.57□□□□□ -0.72
ATG4C-201ENST00000317868 CHD8Q9HCK8 2581 aa10.56□□□□□ -0.72
ATG4C-201ENST00000317868 NDUFS8O00217 210 aa10.56□□□□□ -0.72
ATG4C-201ENST00000317868 G0S2P27469 103 aa10.56□□□□□ -0.72
ATG4C-201ENST00000317868 PIMREGQ9BSJ6 248 aa10.56□□□□□ -0.72
ATG4C-201ENST00000317868 IGKV3D-20A0A0C4DH25 116 aa10.56□□□□□ -0.72
ATG4C-201ENST00000317868 HIST1H1AQ02539 215 aaPredicted RBP10.56□□□□□ -0.72
ATG4C-201ENST00000317868 NCR2O95944 276 aa10.55□□□□□ -0.72
ATG4C-201ENST00000317868 NPYP01303 97 aa10.55□□□□□ -0.72
ATG4C-201ENST00000317868 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
ATG4C-201ENST00000317868 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
ATG4C-201ENST00000317868 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV3-66A0A0C4DH42 116 aa10.55□□□□□ -0.72
ATG4C-201ENST00000317868 H3BUA1 57 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 TWIST1Q15672 202 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 DPF1Q92782 380 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 TP73-AS1Q9UF72 201 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 ZNF124Q15973 351 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 MUC21A0A0G2JKD1 596 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV7-4-1A0A0J9YVY3 117 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 MUC21A0A140T8X8 626 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 A6NDX4 124 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 SOCS3O14543 225 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 IGHG2P01859 326 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 MUC21Q5SSG8 566 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 BRD3OSQ6XYD6 125 aa10.54□□□□□ -0.72
ATG4C-201ENST00000317868 ORM1P02763 201 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 PPBPP02775 128 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 NPSP0C0P6 89 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV4-38-2P0DP08 117 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 CCL19Q99731 98 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV4-4A0A075B6R2 117 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV3OR16-10A0A075B7F0 116 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 LGALS9CQ6DKI2 356 aa10.53□□□□□ -0.72
ATG4C-201ENST00000317868 NDUFA4O00483 81 aa10.52□□□□□ -0.72
ATG4C-201ENST00000317868 HBDP02042 147 aa10.52□□□□□ -0.72
ATG4C-201ENST00000317868 CKS2P33552 79 aa10.52□□□□□ -0.72
ATG4C-201ENST00000317868 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.72
ATG4C-201ENST00000317868 LENEPQ9Y5L5 61 aa10.52□□□□□ -0.72
ATG4C-201ENST00000317868 IGHV3OR16-13A0A075B7E8 117 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 IGHV3-74A0A0B4J1X5 117 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 SMKR1H3BMG3 65 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 TCF21O43680 179 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 TRGV3P03979 118 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 SLC25A34Q6PIV7 304 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 DEFB125Q8N687 156 aa10.52□□□□□ -0.73
ATG4C-201ENST00000317868 SNAI2O43623 268 aa10.51□□□□□ -0.73
ATG4C-201ENST00000317868 ZNF207O43670 478 aaKnown RBP10.51□□□□□ -0.73
ATG4C-201ENST00000317868 ORAOV1Q8WV07 137 aa10.51□□□□□ -0.73
ATG4C-201ENST00000317868 C20orf173Q96LM9 149 aa10.51□□□□□ -0.73
ATG4C-201ENST00000317868 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
ATG4C-201ENST00000317868 PRSS47A8MTI9 375 aa10.51□□□□□ -0.73
ATG4C-201ENST00000317868 HSBP1L1C9JCN9 74 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms