RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 ODF1Q14990 250 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 ZNF562Q6V9R5 426 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 ASCL5Q7RTU5 278 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 FOXC2Q99958 501 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 VGLL1Q99990 258 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 HHLA3Q9XRX5 114 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
CACFD1-202ENST00000316948 WFDC2Q14508 124 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 IGF2RP11717 2491 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 TRBV25-1A0A075B6N4 114 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 PRRG2O14669 202 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 ORM1P02763 201 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
CACFD1-202ENST00000316948 RPEQ96AT9 228 aa12.75□□□□□ -0.37
CACFD1-202ENST00000316948 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
CACFD1-202ENST00000316948 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 IGKCP01834 107 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 ZC2HC1BQ5TFG8 222 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 PRR25Q96S07 402 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 SIGMAR1Q99720 223 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 KAAG1Q9UBP8 84 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 E7EQL1 145 aa12.74□□□□□ -0.37
CACFD1-202ENST00000316948 IGLV1-47P01700 117 aa12.73□□□□□ -0.37
CACFD1-202ENST00000316948 HLA-DMBP28068 263 aa12.73□□□□□ -0.37
CACFD1-202ENST00000316948 IGF2-ASQ6U949 168 aa12.73□□□□□ -0.37
CACFD1-202ENST00000316948 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
CACFD1-202ENST00000316948 MAP1AP78559 2803 aaPredicted RBP12.73□□□□□ -0.37
CACFD1-202ENST00000316948 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
CACFD1-202ENST00000316948 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
CACFD1-202ENST00000316948 PHLDA1Q8WV24 401 aaPredicted RBP12.73□□□□□ -0.37
CACFD1-202ENST00000316948 IGHV3OR16-8A0A075B7F1 116 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 TMEM8BA6NDV4 472 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 FCER1GP30273 86 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 CEND1Q8N111 149 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 MED13LQ71F56 2210 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 SHISA9B4DS77 424 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 H3BMG7 143 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 HIGD1BQ9P298 99 aa12.72□□□□□ -0.37
CACFD1-202ENST00000316948 CEACAM3P40198 252 aa12.71□□□□□ -0.37
CACFD1-202ENST00000316948 GFRALQ6UXV0 394 aa12.71□□□□□ -0.37
CACFD1-202ENST00000316948 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.38
CACFD1-202ENST00000316948 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.38
CACFD1-202ENST00000316948 SPOCK3Q9BQ16 436 aa12.71□□□□□ -0.38
CACFD1-202ENST00000316948 RALYQ9UKM9 306 aaKnown RBP12.71□□□□□ -0.38
CACFD1-202ENST00000316948 VSTM5A8MXK1 200 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 ETDBQ3ZM63 59 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 ZMAT4Q9H898 229 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 DPM2O94777 84 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 PDE6HQ13956 83 aa12.7□□□□□ -0.38
CACFD1-202ENST00000316948 IGHV3-35A0A0C4DH35 117 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 IGLL5B9A064 214 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 TIMM23O14925 209 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 BMI1P35226 326 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 CD300EQ496F6 205 aaPredicted RBP12.69□□□□□ -0.38
CACFD1-202ENST00000316948 ZNF479Q96JC4 524 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
CACFD1-202ENST00000316948 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.69□□□□□ -0.38
CACFD1-202ENST00000316948 PIFOQ8TCI5 191 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 NXT2Q9NPJ8 142 aaKnown RBP12.69□□□□□ -0.38
CACFD1-202ENST00000316948 MRPL35Q9NZE8 188 aaKnown RBP12.69□□□□□ -0.38
CACFD1-202ENST00000316948 ZFHX3Q15911 3703 aa12.69□□□□□ -0.38
CACFD1-202ENST00000316948 ANKHD1Q8IWZ3 2542 aaKnown RBP12.68□□□□□ -0.38
CACFD1-202ENST00000316948 E9PLD3 99 aa12.68□□□□□ -0.38
CACFD1-202ENST00000316948 ERCC8Q13216 396 aa12.68□□□□□ -0.38
CACFD1-202ENST00000316948 FOXI2Q6ZQN5 318 aa12.68□□□□□ -0.38
CACFD1-202ENST00000316948 TNFRSF14Q92956 283 aa12.68□□□□□ -0.38
CACFD1-202ENST00000316948 TM2D2Q9BX73 214 aa12.68□□□□□ -0.38
CACFD1-202ENST00000316948 PRR30Q53SZ7 412 aaPredicted RBP12.67□□□□□ -0.38
CACFD1-202ENST00000316948 AKAP6Q13023 2319 aa12.67□□□□□ -0.38
CACFD1-202ENST00000316948 F8W1H4 67 aa12.67□□□□□ -0.38
CACFD1-202ENST00000316948 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
CACFD1-202ENST00000316948 TMEM190Q8WZ59 177 aa12.67□□□□□ -0.38
CACFD1-202ENST00000316948 SPAG8Q99932 426 aaPredicted RBP12.67□□□□□ -0.38
CACFD1-202ENST00000316948 J3QR89 54 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 NDUFA3O95167 84 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 C12orf74Q32Q52 190 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 DTX2Q86UW9 622 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 MFAP4P55083 255 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 HES1Q14469 280 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 Q8NA96 180 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 RAB1BQ9H0U4 201 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 CACNA1BQ00975 2339 aa12.66□□□□□ -0.38
CACFD1-202ENST00000316948 TRAV26-2A0A0B4J265 109 aa12.65□□□□□ -0.38
CACFD1-202ENST00000316948 ATP5LO75964 103 aa12.65□□□□□ -0.38
CACFD1-202ENST00000316948 RPL7P18124 248 aaKnown RBP12.65□□□□□ -0.38
CACFD1-202ENST00000316948 CELSR1Q9NYQ6 3014 aa12.65□□□□□ -0.38
CACFD1-202ENST00000316948 ONECUT1Q9UBC0 465 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms