RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZC2HC1AQ96GY0 325 aa10.97□□□□□ -0.65
SPAST-201ENST00000315285 MRPL51Q4U2R6 128 aaKnown RBP10.97□□□□□ -0.65
SPAST-201ENST00000315285 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
SPAST-201ENST00000315285 IGHV2-70DA0A0C4DH43 119 aa10.97□□□□□ -0.65
SPAST-201ENST00000315285 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
SPAST-201ENST00000315285 PLCE1Q9P212 2302 aa10.97□□□□□ -0.65
SPAST-201ENST00000315285 WT1P19544 449 aaPredicted RBP10.96□□□□□ -0.65
SPAST-201ENST00000315285 IGLC7A0M8Q6 106 aa10.96□□□□□ -0.65
SPAST-201ENST00000315285 M0R2P5 195 aa10.96□□□□□ -0.65
SPAST-201ENST00000315285 IGLL1P15814 213 aa10.96□□□□□ -0.65
SPAST-201ENST00000315285 SYNJ2BPP57105 145 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 PRSS57Q6UWY2 283 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 CTSZQ9UBR2 303 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 ZNF106Q9H2Y7 1883 aaKnown RBP10.96□□□□□ -0.66
SPAST-201ENST00000315285 GAGE12BA1L429 117 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 NDUFS8O00217 210 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.66
SPAST-201ENST00000315285 SPRNQ5BIV9 151 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 C8orf86Q6ZUL3 223 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 C8orf31Q8N9H6 132 aa10.96□□□□□ -0.66
SPAST-201ENST00000315285 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.66
SPAST-201ENST00000315285 TRGV1A0A0A0MS02 117 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 IGHV1-69DA0A0B4J2H0 117 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 MSMBP08118 114 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 SLC25A16P16260 332 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 TMEM95Q3KNT9 176 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 PYGO2Q9BRQ0 406 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 K7EM74 188 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 LHBP01229 141 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 Q8N8P6 123 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 KLF2Q9Y5W3 355 aaPredicted RBP10.95□□□□□ -0.66
SPAST-201ENST00000315285 SAP30O75446 220 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 MALP21145 153 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 ZNF491Q8N8L2 437 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 C2orf16Q68DN1 1984 aa10.95□□□□□ -0.66
SPAST-201ENST00000315285 ESDP10768 282 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 LTAP01374 205 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 IGFL2Q6UWQ7 119 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 LINC01356Q8N9X3 169 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
SPAST-201ENST00000315285 NPC2P61916 151 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 C2orf66Q6UXQ4 117 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 SIGLEC8Q9NYZ4 499 aa10.94□□□□□ -0.66
SPAST-201ENST00000315285 COA6Q5JTJ3 125 aaKnown RBP10.93□□□□□ -0.66
SPAST-201ENST00000315285 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
SPAST-201ENST00000315285 LCNL1Q6ZST4 164 aa10.93□□□□□ -0.66
SPAST-201ENST00000315285 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
SPAST-201ENST00000315285 C22orf46C9J442 243 aa10.93□□□□□ -0.66
SPAST-201ENST00000315285 KLHL30-AS1Q8NEE0 82 aa10.93□□□□□ -0.66
SPAST-201ENST00000315285 DKK4Q9UBT3 224 aa10.93□□□□□ -0.66
SPAST-201ENST00000315285 INSP01308 110 aa10.93□□□□□ -0.66
SPAST-201ENST00000315285 IGHV3-53P01767 116 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 SHISA9B4DS77 424 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 NPYP01303 97 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 LINC00158P58513 81 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 DEFB131AP59861 70 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 ATXN8Q156A1 80 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 VGLL1Q99990 258 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 C17orf77Q96MU5 243 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 TP53TG1Q9Y2A0 90 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 EML6Q6ZMW3 1958 aa10.92□□□□□ -0.66
SPAST-201ENST00000315285 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 PRADC1Q9BSG0 188 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 TRPT1Q86TN4 253 aaKnown RBP10.91□□□□□ -0.66
SPAST-201ENST00000315285 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 NDUFA4O00483 81 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 GATA3P23771 443 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
SPAST-201ENST00000315285 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 FAM208BQ5VWN6 2430 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 COX8AP10176 69 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 LY6G5BQ8NDX9 201 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
SPAST-201ENST00000315285 TRAV26-2A0A0B4J265 109 aa10.9□□□□□ -0.66
SPAST-201ENST00000315285 SPINK13Q1W4C9 94 aa10.9□□□□□ -0.66
SPAST-201ENST00000315285 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
SPAST-201ENST00000315285 RASL10AQ92737 203 aa10.9□□□□□ -0.66
SPAST-201ENST00000315285 SPXQ9BT56 116 aa10.9□□□□□ -0.66
SPAST-201ENST00000315285 DTX2Q86UW9 622 aa10.9□□□□□ -0.67
SPAST-201ENST00000315285 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.67
SPAST-201ENST00000315285 LTBP2Q14767 1821 aa10.89□□□□□ -0.67
SPAST-201ENST00000315285 ANXA2RQ3ZCQ2 193 aa10.89□□□□□ -0.67
SPAST-201ENST00000315285 OBSL1O75147 1896 aa10.89□□□□□ -0.67
SPAST-201ENST00000315285 NPSP0C0P6 89 aa10.89□□□□□ -0.67
SPAST-201ENST00000315285 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
SPAST-201ENST00000315285 SPG11Q96JI7 2443 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 RPL35AP18077 110 aaKnown RBP10.88□□□□□ -0.67
SPAST-201ENST00000315285 ANAPC13Q9BS18 74 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 MUC6Q6W4X9 2439 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 FAM120AOSQ5T036 256 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 KIAA1549LQ6ZVL6 1849 aa10.88□□□□□ -0.67
SPAST-201ENST00000315285 TRAV13-1A0A0B4J241 112 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 SDHAF1A6NFY7 115 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms