RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 A0A1B0GW15 77 aa15.44■□□□□ 0.06
SSH3-202ENST00000308298 CD33P20138 364 aa15.44■□□□□ 0.06
SSH3-202ENST00000308298 BMI1P35226 326 aa15.44■□□□□ 0.06
SSH3-202ENST00000308298 DEFB113Q30KQ7 82 aa15.44■□□□□ 0.06
SSH3-202ENST00000308298 UNQ9165/PRO28630Q6UXU0 137 aa15.44■□□□□ 0.06
SSH3-202ENST00000308298 ERCC8Q13216 396 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 GATD1Q8NB37 220 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 OR4X2Q8NGF9 303 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 BORCS7Q96B45 105 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 NRN1Q9NPD7 142 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 CSMD2Q7Z408 3487 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 CSPG4Q6UVK1 2322 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 LOC102724200A0A096LPH7 203 aaPredicted RBP15.43■□□□□ 0.06
SSH3-202ENST00000308298 IGHV4-31P0DP07 118 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 ZNF80P51504 273 aaPredicted RBP15.43■□□□□ 0.06
SSH3-202ENST00000308298 LRRC75A-AS1Q8N1F1 130 aa15.43■□□□□ 0.06
SSH3-202ENST00000308298 TMSB15BA0A087X1C1 80 aa15.42■□□□□ 0.06
SSH3-202ENST00000308298 TPPP3Q9BW30 176 aa15.42■□□□□ 0.06
SSH3-202ENST00000308298 RPS20P60866 119 aaKnown RBP15.41■□□□□ 0.06
SSH3-202ENST00000308298 LCNL1Q6ZST4 164 aa15.41■□□□□ 0.06
SSH3-202ENST00000308298 POLQO75417 2590 aa15.41■□□□□ 0.06
SSH3-202ENST00000308298 FSHBP01225 129 aa15.41■□□□□ 0.06
SSH3-202ENST00000308298 ZNF705DP0CH99 300 aaPredicted RBP15.41■□□□□ 0.06
SSH3-202ENST00000308298 ZNF705BP0CI00 300 aaPredicted RBP15.41■□□□□ 0.06
SSH3-202ENST00000308298 Q5PR19 223 aa15.41■□□□□ 0.06
SSH3-202ENST00000308298 CLEC5AQ9NY25 188 aa15.41■□□□□ 0.06
SSH3-202ENST00000308298 SMAD7O15105 426 aaKnown RBP15.4■□□□□ 0.06
SSH3-202ENST00000308298 HSBP1O75506 76 aa15.4■□□□□ 0.06
SSH3-202ENST00000308298 SRSF2Q01130 221 aaKnown RBP15.4■□□□□ 0.06
SSH3-202ENST00000308298 TMEM95Q3KNT9 176 aa15.4■□□□□ 0.06
SSH3-202ENST00000308298 FAM19A2Q8N3H0 131 aa15.4■□□□□ 0.06
SSH3-202ENST00000308298 NPFFR1Q9GZQ6 430 aa15.4■□□□□ 0.06
SSH3-202ENST00000308298 RNF114Q9Y508 228 aa15.4■□□□□ 0.06
SSH3-202ENST00000308298 NTF3P20783 257 aa15.39■□□□□ 0.05
SSH3-202ENST00000308298 RNASEKQ6P5S7 137 aaKnown RBP15.39■□□□□ 0.05
SSH3-202ENST00000308298 LYZL1Q6UWQ5 148 aa15.39■□□□□ 0.05
SSH3-202ENST00000308298 C9orf139Q6ZV77 190 aa15.39■□□□□ 0.05
SSH3-202ENST00000308298 NIT1Q86X76 327 aa15.39■□□□□ 0.05
SSH3-202ENST00000308298 C2orf88Q9BSF0 95 aa15.39■□□□□ 0.05
SSH3-202ENST00000308298 USP9YO00507 2555 aaPredicted RBP15.39■□□□□ 0.05
SSH3-202ENST00000308298 C16orf92Q96LL3 132 aa15.39■□□□□ 0.05
SSH3-202ENST00000308298 FABP5P3A8MUU1 101 aa15.38■□□□□ 0.05
SSH3-202ENST00000308298 KRTDAPP60985 99 aa15.38■□□□□ 0.05
SSH3-202ENST00000308298 IL17RELQ6ZVW7 336 aa15.38■□□□□ 0.05
SSH3-202ENST00000308298 AGPAT4-IT1Q9H0P7 198 aa15.38■□□□□ 0.05
SSH3-202ENST00000308298 TMEM78Q5T7P6 136 aa15.38■□□□□ 0.05
SSH3-202ENST00000308298 CENPEQ02224 2701 aa15.38■□□□□ 0.05
SSH3-202ENST00000308298 KIR2DL5BA0A0G2JN68 375 aa15.37■□□□□ 0.05
SSH3-202ENST00000308298 KIR2DL5BA0A0G2JPC4 375 aa15.37■□□□□ 0.05
SSH3-202ENST00000308298 ZNF493Q6ZR52 646 aa15.37■□□□□ 0.05
SSH3-202ENST00000308298 KIR2DL5AQ8N109 375 aa15.37■□□□□ 0.05
SSH3-202ENST00000308298 URB1-AS1Q96HZ7 61 aa15.37■□□□□ 0.05
SSH3-202ENST00000308298 PTPN13Q12923 2485 aa15.37■□□□□ 0.05
SSH3-202ENST00000308298 PSMB8P28062 276 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 CTRLP40313 264 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 ZNF138P52744 262 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 SSTP61278 116 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 TEX43Q6ZNM6 134 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 C9orf47Q6ZRZ4 202 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 VPREB3Q9UKI3 123 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 PRRC2AP48634 2157 aaKnown RBP15.36■□□□□ 0.05
SSH3-202ENST00000308298 ORM1P02763 201 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 GPHB5Q86YW7 130 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 FER1L6-AS1Q8NA97 138 aa15.36■□□□□ 0.05
SSH3-202ENST00000308298 PEF1Q9UBV8 284 aaKnown RBP15.36■□□□□ 0.05
SSH3-202ENST00000308298 M0R2Z0 102 aa15.35■□□□□ 0.05
SSH3-202ENST00000308298 IGLC6P0CF74 106 aa15.35■□□□□ 0.05
SSH3-202ENST00000308298 Q6YL49 198 aa15.35■□□□□ 0.05
SSH3-202ENST00000308298 TMEM89A2RUT3 159 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 LINC01559Q495D7 138 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 CHCHD1Q96BP2 118 aaKnown RBP15.34■□□□□ 0.05
SSH3-202ENST00000308298 Q96MF0 132 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 PPP1R14DQ9NXH3 145 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 IGHV7-4-1A0A0J9YVY3 117 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 C3orf79P0CE67 100 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 ZNF575Q86XF7 245 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 Q8N976 141 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 C20orf173Q96LM9 149 aa15.34■□□□□ 0.05
SSH3-202ENST00000308298 DAZ1Q9NQZ3 744 aaKnown RBP15.34■□□□□ 0.05
SSH3-202ENST00000308298 A0A1B0GV90 55 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 TMEM213A2RRL7 107 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 M0QZ24 198 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 SOCS3O14543 225 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 ZNF738Q8NE65 137 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 ZANQ9Y493 2812 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 HIST1H1AQ02539 215 aaPredicted RBP15.33■□□□□ 0.04
SSH3-202ENST00000308298 PSMG3-AS1Q96PY0 264 aa15.33■□□□□ 0.04
SSH3-202ENST00000308298 TM4SF20Q53R12 229 aa15.32■□□□□ 0.04
SSH3-202ENST00000308298 RHPN1-AS1Q9BWJ2 59 aa15.32■□□□□ 0.04
SSH3-202ENST00000308298 FAM181BA6NEQ2 426 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 FAM106AQ4KMX7 169 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 DMRTA1Q5VZB9 504 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 C10orf99Q6UWK7 81 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 ABCA12Q86UK0 2595 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 K7EMT4 169 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 LINC00614P0C842 121 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 PRSS57Q6UWY2 283 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 KRTAP1-3Q8IUG1 177 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 NAV2Q8IVL1 2488 aa15.31■□□□□ 0.04
SSH3-202ENST00000308298 MUC21A0A0G2JKD1 596 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms