RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CDKN1BP46527 198 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 FOXE3Q13461 319 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 CCDC144NLQ6NUI1 221 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 KLRB1Q12918 225 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 C2orf91Q6ZV80 131 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 OR8A1Q8NGG7 326 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 LINC01548A6NM66 108 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 CD5LO43866 347 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 PSG9Q00887 426 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 ERCC8Q13216 396 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 FAM104BQ5XKR9 115 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 Q8N9W7 124 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 MSRB1Q9NZV6 116 aa11.75□□□□□ -0.53
CSDC2-201ENST00000306149 A0A087X0K7 114 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 CBY3A6NI87 242 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 C15orf32Q32M92 178 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 RNF182Q8N6D2 247 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 PRAC2D3DTV9 90 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 TWIST1Q15672 202 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 ORMDL3Q8N138 153 aa11.74□□□□□ -0.53
CSDC2-201ENST00000306149 G3V318 75 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 CLEC3BP05452 202 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 MRPL51Q4U2R6 128 aaKnown RBP11.73□□□□□ -0.53
CSDC2-201ENST00000306149 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
CSDC2-201ENST00000306149 PPIFP30405 207 aaKnown RBP11.73□□□□□ -0.53
CSDC2-201ENST00000306149 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 ORM1P02763 201 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 LGALS9BQ3B8N2 356 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 ZNF575Q86XF7 245 aa11.73□□□□□ -0.53
CSDC2-201ENST00000306149 ATP6V0E1O15342 81 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
CSDC2-201ENST00000306149 FGF6P10767 208 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 WFDC3Q8IUB2 231 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 OR1N2Q8NGR9 330 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 SIRPDQ9H106 197 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 ITPR1Q14643 2758 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 PAX8Q06710 450 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 EBI3Q14213 229 aa11.72□□□□□ -0.53
CSDC2-201ENST00000306149 CLEC2AQ6UVW9 174 aa11.71□□□□□ -0.53
CSDC2-201ENST00000306149 C1orf122Q6ZSJ8 110 aa11.71□□□□□ -0.53
CSDC2-201ENST00000306149 FER1L6-AS1Q8NA97 138 aa11.71□□□□□ -0.53
CSDC2-201ENST00000306149 NPYP01303 97 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 CKS2P33552 79 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 SEC11AP67812 179 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 MINOS1Q5TGZ0 78 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 CLEC19AQ6UXS0 136 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 AJUBAQ96IF1 538 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 MINOS1-NBL1R4GNA1 71 aa11.71□□□□□ -0.54
CSDC2-201ENST00000306149 HBDP02042 147 aa11.7□□□□□ -0.54
CSDC2-201ENST00000306149 SAA4P35542 130 aa11.7□□□□□ -0.54
CSDC2-201ENST00000306149 TMEM95Q3KNT9 176 aa11.7□□□□□ -0.54
CSDC2-201ENST00000306149 PEF1Q9UBV8 284 aaKnown RBP11.7□□□□□ -0.54
CSDC2-201ENST00000306149 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 SRSF2Q01130 221 aaKnown RBP11.69□□□□□ -0.54
CSDC2-201ENST00000306149 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 DTX2Q86UW9 622 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 LINC00527Q9UJ94 153 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 IGLC6P0CF74 106 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 LY6DQ14210 128 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 VPS25Q9BRG1 176 aa11.69□□□□□ -0.54
CSDC2-201ENST00000306149 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 SCGB2A1O75556 95 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 BMI1P35226 326 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 NHLH1Q02575 133 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 PRSS57Q6UWY2 283 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 BUB3O43684 328 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 CACNG7P62955 275 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 BOD1L2Q8IYS8 172 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 BPESC1Q9GZL8 116 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
CSDC2-201ENST00000306149 TMEM219Q86XT9 240 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 FAM110DQ8TAY7 271 aaPredicted RBP11.67□□□□□ -0.54
CSDC2-201ENST00000306149 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 C7orf71A4D174 169 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 Q6ZQT7 251 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 CLPSL1A2RUU4 121 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 EVI2AP22794 236 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 UBE2E1P51965 193 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 C18orf15Q96N68 181 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 CNFNQ9BYD5 112 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 CST9LQ9H4G1 147 aa11.67□□□□□ -0.54
CSDC2-201ENST00000306149 FABP5P3A8MUU1 101 aa11.66□□□□□ -0.54
CSDC2-201ENST00000306149 PPBPP02775 128 aa11.66□□□□□ -0.54
CSDC2-201ENST00000306149 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms