RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SGK494Q96LW2 274 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 ATG101Q9BSB4 218 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 DERL1Q9BUN8 251 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 SRD5A3Q9H8P0 318 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 MED9Q9NWA0 146 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 PPP1R14DQ9NXH3 145 aa6.96□□□□□ -1.3
RFX3-201ENST00000302303 LINC00862A6NCI5 91 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 PEX7O00628 323 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 CRXO43186 299 aaPredicted RBP6.95□□□□□ -1.3
RFX3-201ENST00000302303 IGKV3-20P01619 116 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 SRP19P09132 144 aaKnown RBP6.95□□□□□ -1.3
RFX3-201ENST00000302303 RAB14P61106 215 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 HIST1H1AQ02539 215 aaPredicted RBP6.95□□□□□ -1.3
RFX3-201ENST00000302303 HIST1H2BAQ96A08 127 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 TXNDC17Q9BRA2 123 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 SLC35B3Q9H1N7 401 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 ZNF492Q9P255 531 aa6.95□□□□□ -1.3
RFX3-201ENST00000302303 HUWE1Q7Z6Z7 4374 aaKnown RBP6.94□□□□□ -1.3
RFX3-201ENST00000302303 TRBV20OR9-2A0A075B6H5 130 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 J3QL48 77 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 NDUFS6O75380 124 aaKnown RBP6.94□□□□□ -1.3
RFX3-201ENST00000302303 TAGLN2P37802 199 aaKnown RBP6.94□□□□□ -1.3
RFX3-201ENST00000302303 CSN1S1P47710 185 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 EBLN2Q6P2I7 272 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 ZFAND2AQ8N6M9 145 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 CSNK1G2-AS1Q8NCQ2 148 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 Q8TAT8 98 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 CMTM2Q8TAZ6 248 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 TCEAL7Q9BRU2 100 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 RPH3ALQ9UNE2 315 aa6.94□□□□□ -1.3
RFX3-201ENST00000302303 TRBV6-1A0A0K0K1D8 114 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 RAB19A4D1S5 217 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
RFX3-201ENST00000302303 IFNA1P01562 189 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 FRMD6-AS1P0C7T7 363 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 RBMY1A1P0DJD3 496 aaKnown RBP6.93□□□□□ -1.3
RFX3-201ENST00000302303 RBMY1CP0DJD4 496 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 RPL35AP18077 110 aaKnown RBP6.93□□□□□ -1.3
RFX3-201ENST00000302303 ZNF138P52744 262 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 RBMY1FQ15415 496 aaKnown RBP6.93□□□□□ -1.3
RFX3-201ENST00000302303 PRR9Q5T870 116 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 Q6ZQT7 251 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 STHQ8IWL8 128 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 OR4B1Q8NGF8 309 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 OR10J6PQ8NGY7 276 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 EIF5A2Q9GZV4 153 aaKnown RBP6.93□□□□□ -1.3
RFX3-201ENST00000302303 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
RFX3-201ENST00000302303 SERTM2A0A1B0GWG4 89 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 KLLNB2CW77 178 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 TMEM250H0YL14 139 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 M0R2Z0 102 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 PDE6DO43924 150 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 CRISP2P16562 243 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 FXYD7P58549 80 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 FLI1Q01543 452 aaPredicted RBP6.92□□□□□ -1.3
RFX3-201ENST00000302303 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 EIF4E3Q8N5X7 224 aaKnown RBP6.92□□□□□ -1.3
RFX3-201ENST00000302303 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 NBEAL2Q6ZNJ1 2754 aa6.92□□□□□ -1.3
RFX3-201ENST00000302303 LOC102724200A0A096LPH7 203 aaPredicted RBP6.91□□□□□ -1.3
RFX3-201ENST00000302303 F6UZH7 168 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 LTAP01374 205 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 RPL35P42766 123 aaKnown RBP6.91□□□□□ -1.3
RFX3-201ENST00000302303 CRIP1P50238 77 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 ZNF80P51504 273 aaPredicted RBP6.91□□□□□ -1.3
RFX3-201ENST00000302303 DEFA6Q01524 100 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 SPINK13Q1W4C9 94 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 Q86TA4 180 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 LENEPQ9Y5L5 61 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 KIR2DL5BA0A0G2JN68 375 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 KIR2DL5BA0A0G2JPC4 375 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 TRBV7-9A0A0J9YWB2 115 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
RFX3-201ENST00000302303 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 PRNTQ86SH4 94 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 SBSPONQ8IVN8 264 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 KIR2DL5AQ8N109 375 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 KIR2DL5BQ8NHK3 375 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 FMC1Q96HJ9 113 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 CSTL1Q9H114 145 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 PARLQ9H300 379 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 TUBA4BQ9H853 241 aa6.91□□□□□ -1.3
RFX3-201ENST00000302303 COL7A1Q02388 2944 aa6.9□□□□□ -1.3
RFX3-201ENST00000302303 PGPEP1LA6NFU8 196 aa6.9□□□□□ -1.31
RFX3-201ENST00000302303 AKR1C3P42330 323 aa6.9□□□□□ -1.31
RFX3-201ENST00000302303 TAS2R60P59551 318 aa6.9□□□□□ -1.31
RFX3-201ENST00000302303 PEA15Q15121 130 aa6.9□□□□□ -1.31
RFX3-201ENST00000302303 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms