RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CLEC5AQ9NY25 188 aa16.91■□□□□ 0.3
SMAD1-201ENST00000302085 GFRA4Q9GZZ7 299 aa16.91■□□□□ 0.3
SMAD1-201ENST00000302085 AGPAT4-IT1Q9H0P7 198 aa16.91■□□□□ 0.3
SMAD1-201ENST00000302085 TMEM213A2RRL7 107 aa16.9■□□□□ 0.3
SMAD1-201ENST00000302085 CT45A10P0DMU9 189 aa16.9■□□□□ 0.3
SMAD1-201ENST00000302085 GZMBP10144 247 aa16.9■□□□□ 0.3
SMAD1-201ENST00000302085 CDX1P47902 265 aaPredicted RBP16.9■□□□□ 0.3
SMAD1-201ENST00000302085 RPL11P62913 178 aaKnown RBP16.9■□□□□ 0.3
SMAD1-201ENST00000302085 WDR73Q6P4I2 378 aa16.9■□□□□ 0.3
SMAD1-201ENST00000302085 NRN1Q9NPD7 142 aa16.9■□□□□ 0.3
SMAD1-201ENST00000302085 IFITM10A6NMD0 228 aa16.89■□□□□ 0.3
SMAD1-201ENST00000302085 COX19Q49B96 90 aa16.89■□□□□ 0.3
SMAD1-201ENST00000302085 WIPF2Q8TF74 440 aaPredicted RBP16.89■□□□□ 0.3
SMAD1-201ENST00000302085 TMEM160Q9NX00 188 aa16.89■□□□□ 0.3
SMAD1-201ENST00000302085 MYO9AB2RTY4 2548 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 AKAP9Q99996 3911 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 XKRY2A2RUG3 117 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 SH2D1AO60880 128 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 ZNF80P51504 273 aaPredicted RBP16.89■□□□□ 0.29
SMAD1-201ENST00000302085 SYNJ2BPP57105 145 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 REC114Q7Z4M0 266 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 PGLYRP4Q96LB8 373 aa16.89■□□□□ 0.29
SMAD1-201ENST00000302085 FAM231BA6NCW3 169 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 HOXD3P31249 432 aaPredicted RBP16.88■□□□□ 0.29
SMAD1-201ENST00000302085 FAM162BQ5T6X4 162 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 GDF5OSQ5U4N7 250 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 IGKV3-7A0A075B6H7 116 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 LGALS9O00182 355 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 RAB4BP61018 213 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 COA6Q5JTJ3 125 aaKnown RBP16.88■□□□□ 0.29
SMAD1-201ENST00000302085 HIST3H2BBQ8N257 126 aa16.88■□□□□ 0.29
SMAD1-201ENST00000302085 MT-ND6P03923 174 aa16.87■□□□□ 0.29
SMAD1-201ENST00000302085 FOXA3P55318 350 aaPredicted RBP16.87■□□□□ 0.29
SMAD1-201ENST00000302085 RASL11AQ6T310 242 aa16.87■□□□□ 0.29
SMAD1-201ENST00000302085 RBPMS2Q6ZRY4 209 aaKnown RBP16.87■□□□□ 0.29
SMAD1-201ENST00000302085 C9orf47Q6ZRZ4 202 aa16.87■□□□□ 0.29
SMAD1-201ENST00000302085 A0A1B0GXF2 115 aa16.86■□□□□ 0.29
SMAD1-201ENST00000302085 A8MWP6 167 aa16.86■□□□□ 0.29
SMAD1-201ENST00000302085 SRD5A1P18405 259 aa16.86■□□□□ 0.29
SMAD1-201ENST00000302085 ZNF738Q8NE65 137 aa16.86■□□□□ 0.29
SMAD1-201ENST00000302085 NDFIP1Q9BT67 221 aa16.86■□□□□ 0.29
SMAD1-201ENST00000302085 LY6G6DO95868 133 aa16.86■□□□□ 0.29
SMAD1-201ENST00000302085 KLF5Q13887 457 aaPredicted RBP16.86■□□□□ 0.29
SMAD1-201ENST00000302085 ZNF705DP0CH99 300 aaPredicted RBP16.85■□□□□ 0.29
SMAD1-201ENST00000302085 ZNF705BP0CI00 300 aaPredicted RBP16.85■□□□□ 0.29
SMAD1-201ENST00000302085 ZNF138P52744 262 aa16.85■□□□□ 0.29
SMAD1-201ENST00000302085 DEFB136Q30KP8 78 aa16.85■□□□□ 0.29
SMAD1-201ENST00000302085 ATP5L2Q7Z4Y8 100 aa16.85■□□□□ 0.29
SMAD1-201ENST00000302085 HLA-DQA1P01909 254 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 RNASE1P07998 156 aaKnown RBP16.84■□□□□ 0.29
SMAD1-201ENST00000302085 SCGB2A2Q13296 93 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 PDZD11Q5EBL8 140 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 TMEM78Q5T7P6 136 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 HIST2H2BDQ6DRA6 164 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 C4orf3Q8WVX3 66 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 PPP1R14DQ9NXH3 145 aa16.84■□□□□ 0.29
SMAD1-201ENST00000302085 TMEM189A5PLL7 270 aa16.83■□□□□ 0.28
SMAD1-201ENST00000302085 BMI1P35226 326 aa16.83■□□□□ 0.28
SMAD1-201ENST00000302085 CAMPP49913 170 aa16.83■□□□□ 0.28
SMAD1-201ENST00000302085 KIAA1644Q3SXP7 199 aa16.83■□□□□ 0.28
SMAD1-201ENST00000302085 OVOL1O14753 267 aa16.82■□□□□ 0.28
SMAD1-201ENST00000302085 SLURP1P55000 103 aa16.82■□□□□ 0.28
SMAD1-201ENST00000302085 DEFB1P60022 68 aa16.82■□□□□ 0.28
SMAD1-201ENST00000302085 LINC00518Q8N0U6 118 aa16.82■□□□□ 0.28
SMAD1-201ENST00000302085 APCSP02743 223 aa16.82■□□□□ 0.28
SMAD1-201ENST00000302085 ZNF575Q86XF7 245 aa16.82■□□□□ 0.28
SMAD1-201ENST00000302085 TMSB15BA0A087X1C1 80 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 GRIFINA4D1Z8 144 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 C2orf70A6NJV1 201 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 FABP5P3A8MUU1 101 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 HBBP68871 147 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 SLAQ13239 276 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 DCANP1Q8TF63 244 aa16.81■□□□□ 0.28
SMAD1-201ENST00000302085 A0A1B0GUS0 222 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 LINC01619G3V211 115 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 KHDC1LQ5JSQ8 128 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 OR11H1Q8NG94 326 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 OR1N2Q8NGR9 330 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 ZNF418Q8TF45 676 aaPredicted RBP16.8■□□□□ 0.28
SMAD1-201ENST00000302085 NOTCH2Q04721 2471 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 HILS1P60008 231 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 ADAMTSL5Q6ZMM2 481 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 WFDC3Q8IUB2 231 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 DUX3Q96PT4 197 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 C16orf95Q9H693 158 aa16.8■□□□□ 0.28
SMAD1-201ENST00000302085 S100A8P05109 93 aa16.79■□□□□ 0.28
SMAD1-201ENST00000302085 CRISP2P16562 243 aa16.79■□□□□ 0.28
SMAD1-201ENST00000302085 OR10J6PQ8NGY7 276 aa16.79■□□□□ 0.28
SMAD1-201ENST00000302085 LINC00477Q96M19 166 aa16.79■□□□□ 0.28
SMAD1-201ENST00000302085 SSBP4Q9BWG4 385 aaPredicted RBP16.79■□□□□ 0.28
SMAD1-201ENST00000302085 MS4A6AQ9H2W1 248 aa16.79■□□□□ 0.28
SMAD1-201ENST00000302085 HAX1O00165 279 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 TMEM256Q8N2U0 113 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 KLHL30-AS1Q8NEE0 82 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 TP53TG3Q9ULZ0 132 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 ANK3Q12955 4377 aaKnown RBP16.78■□□□□ 0.28
SMAD1-201ENST00000302085 MTORP42345 2549 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 F6UB75 175 aa16.78■□□□□ 0.28
SMAD1-201ENST00000302085 SRSF2Q01130 221 aaKnown RBP16.78■□□□□ 0.28
SMAD1-201ENST00000302085 PRR31Q5SQ13 230 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms