RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TGFAP01135 160 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 ADIPOQQ15848 244 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 SPANXN1Q5VSR9 72 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 PVRIGQ6DKI7 326 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
TRUB1-201ENST00000298746 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 IGHV3-49A0A0A0MS15 119 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 OR11H12B2RN74 326 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 H3BRN7 92 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 APOMO95445 188 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 MFAP4P55083 255 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 PRSS33Q8NF86 280 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 OR11H1Q8NG94 326 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 OR11H2Q8NH07 326 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 PRR25Q96S07 402 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 MBD3L4A6NDZ8 208 aaPredicted RBP8.97□□□□□ -0.97
TRUB1-201ENST00000298746 MBD3L3A6NE82 208 aaPredicted RBP8.97□□□□□ -0.97
TRUB1-201ENST00000298746 MBD3L5A6NJ08 208 aaPredicted RBP8.97□□□□□ -0.97
TRUB1-201ENST00000298746 H3BVH4 76 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 ODF1Q14990 250 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 LYPD1Q8N2G4 141 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 MBD3L2Q8NHZ7 208 aaPredicted RBP8.97□□□□□ -0.97
TRUB1-201ENST00000298746 CLUHP3Q96NS8 147 aa8.97□□□□□ -0.97
TRUB1-201ENST00000298746 TRAV26-2A0A0B4J265 109 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 FABP5P3A8MUU1 101 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 IGLL5B9A064 214 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 NDUFS8O00217 210 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 TIMM23O14925 209 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 SCGB2A1O75556 95 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 ATP5LO75964 103 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 ERCC8Q13216 396 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 ZNF493Q6ZR52 646 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 DMXL2Q8TDJ6 3036 aa8.96□□□□□ -0.97
TRUB1-201ENST00000298746 F8W1H4 67 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 I3L2K1 104 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 C12orf74Q32Q52 190 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 ANKHD1Q8IWZ3 2542 aaKnown RBP8.96□□□□□ -0.98
TRUB1-201ENST00000298746 ZNF883P0CG24 379 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 EFNA4P52798 201 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 TMEM155Q4W5P6 130 aa8.96□□□□□ -0.98
TRUB1-201ENST00000298746 RALYQ9UKM9 306 aaKnown RBP8.96□□□□□ -0.98
TRUB1-201ENST00000298746 SPAARA0A1B0GVQ0 90 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 K7EM74 188 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 DEFB104AQ8WTQ1 72 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 SPAG8Q99932 426 aaPredicted RBP8.95□□□□□ -0.98
TRUB1-201ENST00000298746 TACC2O95359 2948 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 SCGB1C2P0DMR2 95 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 PSMB2P49721 201 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 LINC00311Q8N616 119 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 BUB1B-PAK6H3BSN5 160 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 K7EIM0 57 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
TRUB1-201ENST00000298746 GFRALQ6UXV0 394 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 VKORC1Q9BQB6 163 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 C21orf62Q9NYP8 219 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 FAM215AQ9Y5M1 114 aa8.95□□□□□ -0.98
TRUB1-201ENST00000298746 DEFB124Q8NES8 71 aa8.94□□□□□ -0.98
TRUB1-201ENST00000298746 RAB1BQ9H0U4 201 aa8.94□□□□□ -0.98
TRUB1-201ENST00000298746 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
TRUB1-201ENST00000298746 ADGRG4Q8IZF6 3080 aa8.94□□□□□ -0.98
TRUB1-201ENST00000298746 INSL3P51460 131 aa8.94□□□□□ -0.98
TRUB1-201ENST00000298746 DTX2Q86UW9 622 aa8.94□□□□□ -0.98
TRUB1-201ENST00000298746 CDX4O14627 284 aaPredicted RBP8.93□□□□□ -0.98
TRUB1-201ENST00000298746 PRRG2O14669 202 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 HOXA3O43365 443 aaPredicted RBP8.93□□□□□ -0.98
TRUB1-201ENST00000298746 S100A4P26447 101 aaKnown RBP8.93□□□□□ -0.98
TRUB1-201ENST00000298746 SPANXB1Q9NS25 103 aaPredicted RBP8.93□□□□□ -0.98
TRUB1-201ENST00000298746 CEACAM3P40198 252 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 SYT8Q8NBV8 401 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 RNASE6Q93091 150 aaKnown RBP8.93□□□□□ -0.98
TRUB1-201ENST00000298746 LAGE3Q14657 143 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 PSMG4Q5JS54 123 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 MAPKAPK5-AS1Q8N8E1 139 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 SMPXQ9UHP9 88 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 RAXQ9Y2V3 346 aa8.93□□□□□ -0.98
TRUB1-201ENST00000298746 KALRNO60229 2985 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 WI2-2373I1.2A0A1W2PRP0 233 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 FCN3O75636 299 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 CCDC144NLQ6NUI1 221 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.92□□□□□ -0.982e-9■■■■□ 20.2
TRUB1-201ENST00000298746 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 C20orf78Q9BR46 151 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 HIGD1BQ9P298 99 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 NBR2O15453 112 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 MGPP08493 103 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 PDE6HQ13956 83 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 GEMIN7Q9H840 131 aaKnown RBP8.92□□□□□ -0.98
TRUB1-201ENST00000298746 TRAV26-1A0A087WT03 109 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 M0R381 172 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 U3KQK5 164 aa8.92□□□□□ -0.98
TRUB1-201ENST00000298746 CFAP47Q6ZTR5 3102 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 NOTCH3Q9UM47 2321 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms