RNA–Protein interactions for RNA: ENST00000286448.11

VAMP7-202, Transcript of vesicle associated membrane protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP7, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-202ENST00000286448 SIGLEC15Q6ZMC9 328 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 NUP37Q8NFH4 326 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 C8orf49Q96NF6 230 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
VAMP7-202ENST00000286448 F8W1H4 67 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 SMKR1H3BMG3 65 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 LOXP28300 417 aaPredicted RBP10.3□□□□□ -0.76
VAMP7-202ENST00000286448 CKS2P33552 79 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 WFDC2Q14508 124 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 SCNM1Q9BWG6 230 aa10.3□□□□□ -0.76
VAMP7-202ENST00000286448 TMEM133Q9H2Q1 129 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 HHLA3Q9XRX5 114 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 A0A1W2PRD5 423 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 A0A1W2PRF3 423 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 A0A1W2PRM7 423 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 ENSAO43768 121 aaKnown RBP10.29□□□□□ -0.76
VAMP7-202ENST00000286448 MC5RP33032 325 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 RNASE6Q93091 150 aaKnown RBP10.29□□□□□ -0.76
VAMP7-202ENST00000286448 ZMAT4Q9H898 229 aa10.29□□□□□ -0.76
VAMP7-202ENST00000286448 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 E9PLD3 99 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 ODF1Q14990 250 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 CCDC144NLQ6NUI1 221 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 CEND1Q8N111 149 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 LYPD1Q8N2G4 141 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 LINC00311Q8N616 119 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 TM2D2Q9BX73 214 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 M0R3E3 92 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 RBP4P02753 201 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 ZNF562Q6V9R5 426 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 SHANK2-AS3Q9BTD1 123 aa10.28□□□□□ -0.76
VAMP7-202ENST00000286448 FAM90A27PA6NNH2 459 aa10.27□□□□□ -0.76
VAMP7-202ENST00000286448 C3orf36Q3SXR2 165 aa10.27□□□□□ -0.76
VAMP7-202ENST00000286448 IGLL5B9A064 214 aa10.27□□□□□ -0.77
VAMP7-202ENST00000286448 SH2D1AO60880 128 aa10.27□□□□□ -0.77
VAMP7-202ENST00000286448 SPAG8Q99932 426 aaPredicted RBP10.27□□□□□ -0.77
VAMP7-202ENST00000286448 DYNLRB1Q9NP97 96 aa10.27□□□□□ -0.77
VAMP7-202ENST00000286448 CFAP46Q8IYW2 2715 aa10.27□□□□□ -0.77
VAMP7-202ENST00000286448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.26□□□□□ -0.77
VAMP7-202ENST00000286448 H3BRN7 92 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 TNFRSF13BO14836 293 aaPredicted RBP10.26□□□□□ -0.77
VAMP7-202ENST00000286448 IGKCP01834 107 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 Q5PR19 223 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 C8orf31Q8N9H6 132 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 VSTM5A8MXK1 200 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 DLX6P56179 175 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 TWIST1Q15672 202 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
VAMP7-202ENST00000286448 FLNCQ14315 2725 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 H3BMG7 143 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 K7EMI3 77 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 PRSS1P07477 247 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 EVI2AP22794 236 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 LEPP41159 167 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 NBL1P41271 181 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 RAB9AP51151 201 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 SRSF1Q07955 248 aaKnown RBP eCLIP10.25□□□□□ -0.77
VAMP7-202ENST00000286448 MAP1LC3AQ9H492 121 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 I3L2K1 104 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 CKS1BP61024 79 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 SPG11Q96JI7 2443 aa10.25□□□□□ -0.77
VAMP7-202ENST00000286448 TEX22C9J3V5 150 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
VAMP7-202ENST00000286448 NDUFB3O43676 98 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 COX7A1P24310 79 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 FCER1GP30273 86 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 SIGLEC9Q9Y336 463 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 NPIPB5A8MRT5 1133 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 CRYGBP07316 175 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
VAMP7-202ENST00000286448 MRPS12O15235 138 aaKnown RBP10.23□□□□□ -0.77
VAMP7-202ENST00000286448 DPM2O94777 84 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 HLA-DRB4P13762 266 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 TCTEX1D4Q5JR98 221 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 KLF17Q5JT82 389 aaPredicted RBP10.23□□□□□ -0.77
VAMP7-202ENST00000286448 FOXC2Q99958 501 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 IGHV1-8P0DP01 117 aa10.23□□□□□ -0.77
VAMP7-202ENST00000286448 EGR2P11161 476 aaPredicted RBP10.22□□□□□ -0.77
VAMP7-202ENST00000286448 SCGB2A2Q13296 93 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 PLGLAQ15195 96 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 C12orf74Q32Q52 190 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 GAGE13Q4V321 117 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 TMEM155Q4W5P6 130 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 AMTNQ6UX39 209 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 ZNF502Q8TBZ5 544 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
VAMP7-202ENST00000286448 TAL2Q16559 108 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
VAMP7-202ENST00000286448 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms