RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 IGHG4P01861 327 aa18.5■□□□□ 0.55
RETREG2-201ENST00000273048 NDPQ00604 133 aa18.5■□□□□ 0.55
RETREG2-201ENST00000273048 SPCS1Q9Y6A9 102 aa18.5■□□□□ 0.55
RETREG2-201ENST00000273048 PTPRZ1P23471 2315 aaPredicted RBP18.5■□□□□ 0.55
RETREG2-201ENST00000273048 B9A039 149 aa18.5■□□□□ 0.55
RETREG2-201ENST00000273048 LEPP41159 167 aa18.5■□□□□ 0.55
RETREG2-201ENST00000273048 COX8CQ7Z4L0 72 aa18.5■□□□□ 0.55
RETREG2-201ENST00000273048 COL25A1Q9BXS0 654 aaPredicted RBP18.5■□□□□ 0.55
RETREG2-201ENST00000273048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.49■□□□□ 0.55
RETREG2-201ENST00000273048 LY6HO94772 140 aa18.49■□□□□ 0.55
RETREG2-201ENST00000273048 PPIFP30405 207 aaKnown RBP18.49■□□□□ 0.55
RETREG2-201ENST00000273048 C21orf62Q9NYP8 219 aa18.49■□□□□ 0.55
RETREG2-201ENST00000273048 DPM3Q9P2X0 92 aa18.49■□□□□ 0.55
RETREG2-201ENST00000273048 ABCA4P78363 2273 aa18.49■□□□□ 0.55
RETREG2-201ENST00000273048 GATA1P15976 413 aaPredicted RBP18.49■□□□□ 0.55
RETREG2-201ENST00000273048 RPL7P18124 248 aaKnown RBP18.49■□□□□ 0.55
RETREG2-201ENST00000273048 MAP1LC3AQ9H492 121 aa18.49■□□□□ 0.55
RETREG2-201ENST00000273048 NDUFA3O95167 84 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 C5orf64Q2M2E5 130 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 S100A7AQ86SG5 101 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 WNK2Q9Y3S1 2297 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 CEP295Q9C0D2 2601 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 G3V4G9 280 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 GCSHP23434 173 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 ERCC8Q13216 396 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 NPBQ8NG41 125 aa18.48■□□□□ 0.55
RETREG2-201ENST00000273048 BMI1P35226 326 aa18.47■□□□□ 0.55
RETREG2-201ENST00000273048 PRR30Q53SZ7 412 aaPredicted RBP18.47■□□□□ 0.55
RETREG2-201ENST00000273048 FXYD2P54710 66 aa18.47■□□□□ 0.55
RETREG2-201ENST00000273048 ODF1Q14990 250 aa18.47■□□□□ 0.55
RETREG2-201ENST00000273048 Q8NA96 180 aa18.47■□□□□ 0.55
RETREG2-201ENST00000273048 CD3EP07766 207 aa18.46■□□□□ 0.55
RETREG2-201ENST00000273048 HHLA3Q9XRX5 114 aa18.46■□□□□ 0.55
RETREG2-201ENST00000273048 ARPC1AQ92747 370 aa18.46■□□□□ 0.55
RETREG2-201ENST00000273048 NCBP2LA6PVI3 153 aaKnown RBP18.45■□□□□ 0.54
RETREG2-201ENST00000273048 TNFRSF6BO95407 300 aa18.45■□□□□ 0.54
RETREG2-201ENST00000273048 PRSS1P07477 247 aa18.45■□□□□ 0.54
RETREG2-201ENST00000273048 NEGR1Q7Z3B1 354 aa18.45■□□□□ 0.54
RETREG2-201ENST00000273048 PSMG3-AS1Q96PY0 264 aa18.45■□□□□ 0.54
RETREG2-201ENST00000273048 ZNF562Q6V9R5 426 aa18.45■□□□□ 0.54
RETREG2-201ENST00000273048 LINC01560Q8TB33 94 aa18.45■□□□□ 0.54
RETREG2-201ENST00000273048 PRAC2D3DTV9 90 aa18.44■□□□□ 0.54
RETREG2-201ENST00000273048 K7ERJ3 54 aa18.44■□□□□ 0.54
RETREG2-201ENST00000273048 ZNF672Q499Z4 452 aaPredicted RBP18.44■□□□□ 0.54
RETREG2-201ENST00000273048 DYNAPQ8N1N2 210 aa18.44■□□□□ 0.54
RETREG2-201ENST00000273048 CTSGP08311 255 aa18.44■□□□□ 0.54
RETREG2-201ENST00000273048 FCER1GP30273 86 aa18.44■□□□□ 0.54
RETREG2-201ENST00000273048 FBLL1A6NHQ2 334 aaKnown RBP18.43■□□□□ 0.54
RETREG2-201ENST00000273048 SAMD5Q5TGI4 173 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 GTSCR1Q86UQ5 136 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 ZNF48Q96MX3 618 aaPredicted RBP18.43■□□□□ 0.54
RETREG2-201ENST00000273048 NPFFR1Q9GZQ6 430 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 K7EMI3 77 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 SMIM13P0DJ93 91 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 FABP2P12104 132 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 LY6G5BQ8NDX9 201 aa18.43■□□□□ 0.54
RETREG2-201ENST00000273048 RNF182Q8N6D2 247 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 OR11H6Q8NGC7 330 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 FOXC2Q99958 501 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 ZMAT4Q9H898 229 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 TTC9CQ8N5M4 171 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 OR5A1Q8NGJ0 315 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 TMEM158Q8WZ71 300 aa18.42■□□□□ 0.54
RETREG2-201ENST00000273048 FABP5P3A8MUU1 101 aa18.41■□□□□ 0.54
RETREG2-201ENST00000273048 CHAC1Q9BUX1 264 aa18.41■□□□□ 0.54
RETREG2-201ENST00000273048 CNFNQ9BYD5 112 aa18.41■□□□□ 0.54
RETREG2-201ENST00000273048 IGKCP01834 107 aa18.4■□□□□ 0.54
RETREG2-201ENST00000273048 IL17RELQ6ZVW7 336 aa18.4■□□□□ 0.54
RETREG2-201ENST00000273048 LINC01546A6NGU7 62 aa18.4■□□□□ 0.54
RETREG2-201ENST00000273048 CEACAM3P40198 252 aa18.4■□□□□ 0.54
RETREG2-201ENST00000273048 NXT2Q9NPJ8 142 aaKnown RBP18.4■□□□□ 0.54
RETREG2-201ENST00000273048 TLN1Q9Y490 2541 aaKnown RBP18.39■□□□□ 0.54
RETREG2-201ENST00000273048 DTX2Q86UW9 622 aa18.39■□□□□ 0.53
RETREG2-201ENST00000273048 PIFOQ8TCI5 191 aa18.39■□□□□ 0.53
RETREG2-201ENST00000273048 ZC2HC1BQ5TFG8 222 aa18.39■□□□□ 0.53
RETREG2-201ENST00000273048 TRBV25-1A0A075B6N4 114 aa18.38■□□□□ 0.53
RETREG2-201ENST00000273048 IGHV3-66A0A0C4DH42 116 aa18.38■□□□□ 0.53
RETREG2-201ENST00000273048 TMEM238C9JI98 176 aa18.38■□□□□ 0.53
RETREG2-201ENST00000273048 CACNA1BQ00975 2339 aa18.38■□□□□ 0.53
RETREG2-201ENST00000273048 TRGV3P03979 118 aa18.38■□□□□ 0.53
RETREG2-201ENST00000273048 ANKHD1Q8IWZ3 2542 aaKnown RBP18.37■□□□□ 0.53
RETREG2-201ENST00000273048 TMEM8BA6NDV4 472 aa18.37■□□□□ 0.53
RETREG2-201ENST00000273048 GRNP28799 593 aaKnown RBP18.37■□□□□ 0.53
RETREG2-201ENST00000273048 TMEM160Q9NX00 188 aa18.37■□□□□ 0.53
RETREG2-201ENST00000273048 HIGD1BQ9P298 99 aa18.37■□□□□ 0.53
RETREG2-201ENST00000273048 TRAV26-2A0A0B4J265 109 aa18.36■□□□□ 0.53
RETREG2-201ENST00000273048 ODF3BA8MYP8 253 aa18.36■□□□□ 0.53
RETREG2-201ENST00000273048 SRSF2Q01130 221 aaKnown RBP18.36■□□□□ 0.53
RETREG2-201ENST00000273048 NHP2Q9NX24 153 aaKnown RBP18.36■□□□□ 0.53
RETREG2-201ENST00000273048 C11orf21Q9P2W6 132 aa18.36■□□□□ 0.53
RETREG2-201ENST00000273048 IGHV3OR16-13A0A075B7E8 117 aa18.35■□□□□ 0.53
RETREG2-201ENST00000273048 IGHV3-74A0A0B4J1X5 117 aa18.35■□□□□ 0.53
RETREG2-201ENST00000273048 IGKV3D-20A0A0C4DH25 116 aa18.35■□□□□ 0.53
RETREG2-201ENST00000273048 RPL24P83731 157 aaKnown RBP18.35■□□□□ 0.53
RETREG2-201ENST00000273048 LINC01559Q495D7 138 aa18.35■□□□□ 0.53
RETREG2-201ENST00000273048 TRAV40A0A0B4J280 105 aa18.35■□□□□ 0.53
RETREG2-201ENST00000273048 MED13LQ71F56 2210 aa18.35■□□□□ 0.53
RETREG2-201ENST00000273048 DPM2O94777 84 aa18.34■□□□□ 0.53
RETREG2-201ENST00000273048 PHLDA1Q8WV24 401 aaPredicted RBP18.34■□□□□ 0.53
RETREG2-201ENST00000273048 ASH1LQ9NR48 2969 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms