RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 COX19Q49B96 90 aa11.94□□□□□ -0.5
FOXRED1-201ENST00000263578 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
FOXRED1-201ENST00000263578 COX8CQ7Z4L0 72 aa11.94□□□□□ -0.5
FOXRED1-201ENST00000263578 NUP35Q8NFH5 326 aa11.94□□□□□ -0.5
FOXRED1-201ENST00000263578 NDFIP1Q9BT67 221 aa11.94□□□□□ -0.5
FOXRED1-201ENST00000263578 NRN1Q9NPD7 142 aa11.94□□□□□ -0.5
FOXRED1-201ENST00000263578 WDR73Q6P4I2 378 aa11.93□□□□□ -0.5
FOXRED1-201ENST00000263578 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
FOXRED1-201ENST00000263578 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
FOXRED1-201ENST00000263578 GNB1LQ9BYB4 327 aa11.93□□□□□ -0.5
FOXRED1-201ENST00000263578 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
FOXRED1-201ENST00000263578 ANK3Q12955 4377 aaKnown RBP11.93□□□□□ -0.5
FOXRED1-201ENST00000263578 TMEM213A2RRL7 107 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 A8MWP6 167 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 SNURFLB1AK76 121 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 SOCS3O14543 225 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 MT-ND6P03923 174 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 FRMD6-AS1P0C7T7 363 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 CRIP1P50238 77 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 RPL11P62913 178 aaKnown RBP11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 HOXA5P20719 270 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 EDN2P20800 178 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 ERCC8Q13216 396 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 TCF24Q7RTU0 167 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 MRPL18Q9H0U6 180 aaKnown RBP11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 GSN-AS1Q9NRJ2 163 aa11.92□□□□□ -0.5
FOXRED1-201ENST00000263578 FAM231BA6NCW3 169 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 LGALS9O00182 355 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 SRD5A1P18405 259 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 ANKRD39Q53RE8 183 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 FAM162BQ5T6X4 162 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 ZNF738Q8NE65 137 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
FOXRED1-201ENST00000263578 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 SYNJ2BPP57105 145 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 TMEM136Q6ZRR5 245 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 ATP5L2Q7Z4Y8 100 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 WIPF2Q8TF74 440 aaPredicted RBP11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 C20orf173Q96LM9 149 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 SMR3AQ99954 134 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 SH2D1AO60880 128 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 TMEM78Q5T7P6 136 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 C4orf3Q8WVX3 66 aa11.9□□□□□ -0.5
FOXRED1-201ENST00000263578 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 HLA-DQA1P01909 254 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 RAB4BP61018 213 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 C9orf47Q6ZRZ4 202 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 C18orf65Q6ZTR6 163 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
FOXRED1-201ENST00000263578 IGKV3-7A0A075B6H7 116 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 GZMBP10144 247 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 ZNF138P52744 262 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 SAMD13Q5VXD3 122 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 PGLYRP4Q96LB8 373 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 DEFB136Q30KP8 78 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
FOXRED1-201ENST00000263578 MTORP42345 2549 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 A0A1B0GXF2 115 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 LY6G6DO95868 133 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 ZNF80P51504 273 aaPredicted RBP11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 HILS1P60008 231 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 GFI1BQ5VTD9 330 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 TMEM189A5PLL7 270 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 LINC01619G3V211 115 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 OVOL1O14753 267 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 HBBP68871 147 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 HIST3H2BBQ8N257 126 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
FOXRED1-201ENST00000263578 NOTCH2Q04721 2471 aa11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 HIVEP2P31629 2446 aa11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 C2orf70A6NJV1 201 aa11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 SLURP1P55000 103 aa11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 Q6AWC8 147 aa11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 OR10J6PQ8NGY7 276 aa11.86□□□□□ -0.51
FOXRED1-201ENST00000263578 OR11H1Q8NG94 326 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 DCANP1Q8TF63 244 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 DPF1Q92782 380 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 C16orf95Q9H693 158 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 OTOGQ6ZRI0 2925 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 IFITM10A6NMD0 228 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 APCSP02743 223 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 ID1P41134 155 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 CAMPP49913 170 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 PDZD11Q5EBL8 140 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 GDF5OSQ5U4N7 250 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 WFDC12Q8WWY7 111 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
FOXRED1-201ENST00000263578 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 468.9 ms