RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 ACACBO00763 2458 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 RHOGP84095 191 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 C2orf91Q6ZV80 131 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 PRORYQ9H606 182 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 CELSR1Q9NYQ6 3014 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 PAX8Q06710 450 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 MINOS1Q5TGZ0 78 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 MINOS1-NBL1R4GNA1 71 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 ATP6V0E1O15342 81 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 CLEC3BP05452 202 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 ZNF502Q8TBZ5 544 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 ZFAND3Q9H8U3 227 aa12.94□□□□□ -0.34
PDE4C-201ENST00000262805 G3V318 75 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 ORM1P02763 201 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
PDE4C-201ENST00000262805 KLRB1Q12918 225 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
PDE4C-201ENST00000262805 VPS13CQ709C8 3753 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 IGHV3-49A0A0A0MS15 119 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 OOSP1A8MZH6 123 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 COX8AP10176 69 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 CKS2P33552 79 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 DTX2Q86UW9 622 aa12.93□□□□□ -0.34
PDE4C-201ENST00000262805 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
PDE4C-201ENST00000262805 CACNG7P62955 275 aa12.92□□□□□ -0.34
PDE4C-201ENST00000262805 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
PDE4C-201ENST00000262805 CLPSL1A2RUU4 121 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 DEFB125Q8N687 156 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 CBY3A6NI87 242 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 BUB3O43684 328 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 FGF6P10767 208 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 SAA4P35542 130 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 VAMP3Q15836 100 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 PRSS57Q6UWY2 283 aa12.91□□□□□ -0.34
PDE4C-201ENST00000262805 FAM110DQ8TAY7 271 aaPredicted RBP12.91□□□□□ -0.34
PDE4C-201ENST00000262805 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
PDE4C-201ENST00000262805 BMI1P35226 326 aa12.9□□□□□ -0.34
PDE4C-201ENST00000262805 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
PDE4C-201ENST00000262805 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.34
PDE4C-201ENST00000262805 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.9□□□□□ -0.34
PDE4C-201ENST00000262805 PKD1L2Q7Z442 2459 aa12.9□□□□□ -0.34
PDE4C-201ENST00000262805 C12orf54Q6X4T0 127 aa12.9□□□□□ -0.34
PDE4C-201ENST00000262805 HBDP02042 147 aa12.89□□□□□ -0.35
PDE4C-201ENST00000262805 SFTPCP11686 197 aa12.89□□□□□ -0.35
PDE4C-201ENST00000262805 Q6ZQT7 251 aa12.89□□□□□ -0.35
PDE4C-201ENST00000262805 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
PDE4C-201ENST00000262805 PPP1R14DQ9NXH3 145 aa12.89□□□□□ -0.35
PDE4C-201ENST00000262805 C11orf21Q9P2W6 132 aa12.89□□□□□ -0.35
PDE4C-201ENST00000262805 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
PDE4C-201ENST00000262805 EVI2AP22794 236 aa12.88□□□□□ -0.35
PDE4C-201ENST00000262805 RPS20P60866 119 aaKnown RBP12.88□□□□□ -0.35
PDE4C-201ENST00000262805 UBTD1Q9HAC8 227 aa12.88□□□□□ -0.35
PDE4C-201ENST00000262805 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
PDE4C-201ENST00000262805 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
PDE4C-201ENST00000262805 UBE2E1P51965 193 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 C18orf15Q96N68 181 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 OR4C5Q8NGB2 326 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 BPESC1Q9GZL8 116 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 DKK2Q9UBU2 259 aa12.87□□□□□ -0.35
PDE4C-201ENST00000262805 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
PDE4C-201ENST00000262805 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
PDE4C-201ENST00000262805 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
PDE4C-201ENST00000262805 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
PDE4C-201ENST00000262805 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 AMMECR1LQ6DCA0 310 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 TMEM219Q86XT9 240 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 IGHV3OR16-10A0A075B7F0 116 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 TRAV8-6A0A0B4J262 113 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 LMO4P61968 165 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 USP24Q9UPU5 2620 aa12.85□□□□□ -0.35
PDE4C-201ENST00000262805 SPTAN1Q13813 2472 aaKnown RBP12.84□□□□□ -0.35
PDE4C-201ENST00000262805 CENPVL3A0A0U1RRI6 287 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 GOSR1O95249 250 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 TRGV3P03979 118 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
PDE4C-201ENST00000262805 CD5LO43866 347 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 RBX1P62877 108 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
PDE4C-201ENST00000262805 TNFRSF6BO95407 300 aa12.83□□□□□ -0.36
PDE4C-201ENST00000262805 TMEM97Q5BJF2 176 aa12.83□□□□□ -0.36
PDE4C-201ENST00000262805 MAP1LC3AQ9H492 121 aa12.83□□□□□ -0.36
PDE4C-201ENST00000262805 K7EP13 123 aa12.83□□□□□ -0.36
PDE4C-201ENST00000262805 LEPP41159 167 aa12.83□□□□□ -0.36
PDE4C-201ENST00000262805 KLK9Q2XQG4 91 aa12.83□□□□□ -0.36
PDE4C-201ENST00000262805 BOD1L2Q8IYS8 172 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms