RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PROP1O75360 226 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 ERCC8Q13216 396 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-201ENST00000261646 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-201ENST00000261646 SIVA1O15304 175 aa12.94□□□□□ -0.34
SREBF1-201ENST00000261646 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
SREBF1-201ENST00000261646 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
SREBF1-201ENST00000261646 ABHD17AQ96GS6 310 aa12.94□□□□□ -0.34
SREBF1-201ENST00000261646 PTPRQQ9UMZ3 2332 aa12.94□□□□□ -0.34
SREBF1-201ENST00000261646 TRGV3P03979 118 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 ZNF474Q6S9Z5 364 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-201ENST00000261646 C1orf122Q6ZSJ8 110 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 RAX2Q96IS3 184 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 CCL21O00585 134 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 IGLV2-8P01709 118 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 KLRB1Q12918 225 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 C14orf178Q8N769 122 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-201ENST00000261646 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
SREBF1-201ENST00000261646 CEACAM4O75871 244 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 COL8A2P25067 703 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 LINC00310P59036 64 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
SREBF1-201ENST00000261646 CEND1Q8N111 149 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 IGHV3OR16-10A0A075B7F0 116 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 MUC22E2RYF6 1773 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-201ENST00000261646 WFDC2Q14508 124 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 TMEM95Q3KNT9 176 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 PRR25Q96S07 402 aa12.92□□□□□ -0.34
SREBF1-201ENST00000261646 TRAV21A0A0B4J279 112 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 PDE6HQ13956 83 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 C9JAW5 83 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 FXYD2P54710 66 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 C15orf32Q32M92 178 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 DDB2Q92466 427 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 EFNA4P52798 201 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 TRBV25-1A0A075B6N4 114 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 LY6EQ16553 131 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 TMEM155Q4W5P6 130 aa12.91□□□□□ -0.34
SREBF1-201ENST00000261646 SZT2Q5T011 3432 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 TMEM131Q92545 1883 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 BUB1B-PAK6H3BSN5 160 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 MEIG1Q5JSS6 88 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 CSPG4Q6UVK1 2322 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 IGHV3-11P01762 117 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 TRAV26-2A0A0B4J265 109 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 FAM57AQ8TBR7 257 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.34
SREBF1-201ENST00000261646 TRAV12-3A0A0B4J271 114 aa12.89□□□□□ -0.35
SREBF1-201ENST00000261646 G3V4G9 280 aa12.89□□□□□ -0.35
SREBF1-201ENST00000261646 IGHG3P01860 377 aa12.89□□□□□ -0.35
SREBF1-201ENST00000261646 CD7P09564 240 aa12.89□□□□□ -0.35
SREBF1-201ENST00000261646 SLC25A16P16260 332 aa12.89□□□□□ -0.35
SREBF1-201ENST00000261646 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
SREBF1-201ENST00000261646 KLRD1Q13241 179 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 Q8N8P6 123 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 LINC00527Q9UJ94 153 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 SCGB1A1P11684 91 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 PAX1P15863 534 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 TMEM14CQ9P0S9 112 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 C2CD3Q4AC94 2353 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 RNF182Q8N6D2 247 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 MRPL36Q9P0J6 103 aaKnown RBP12.88□□□□□ -0.35
SREBF1-201ENST00000261646 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.88□□□□□ -0.35
SREBF1-201ENST00000261646 C22orf46C9J442 243 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 NDPQ00604 133 aa12.88□□□□□ -0.35
SREBF1-201ENST00000261646 GATA1P15976 413 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-201ENST00000261646 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 NAV3Q8IVL0 2385 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 VCANP13611 3396 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 GATA4P43694 442 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 LINC00322Q6ZN03 302 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-201ENST00000261646 DTX2Q86UW9 622 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 PPDPFLQ8WWR9 84 aa12.87□□□□□ -0.35
SREBF1-201ENST00000261646 A0A1W2PNU3 283 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-201ENST00000261646 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
SREBF1-201ENST00000261646 E7EUB6 86 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 DAZAP2Q15038 168 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-201ENST00000261646 A0A0U1RRA0 63 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 MYMXA0A1B0GTQ4 84 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 IGLV1-44P01699 117 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 GP9P14770 177 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 C2orf66Q6UXQ4 117 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 PRADC1Q9BSG0 188 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 LY6HO94772 140 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
SREBF1-201ENST00000261646 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 IGLL5B9A064 214 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-201ENST00000261646 RNF5Q99942 180 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 MSRB1Q9NZV6 116 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms