RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 SYT8Q8NBV8 401 aa11.9□□□□□ -0.51
KCTD3-201ENST00000259154 FXYD5Q96DB9 178 aa11.9□□□□□ -0.51
KCTD3-201ENST00000259154 H3BRM9 83 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 SPATA12Q7Z6I5 190 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
KCTD3-201ENST00000259154 TIMM23O14925 209 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 HLA-DMBP28068 263 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 COL12A1Q99715 3063 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 TRAV2A0A0B4J234 112 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 TOMM40O96008 361 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 LGALS3P17931 250 aaKnown RBP11.89□□□□□ -0.51
KCTD3-201ENST00000259154 FXYD2P54710 66 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 NDPQ00604 133 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 TMEM95Q3KNT9 176 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
KCTD3-201ENST00000259154 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 J3QW42 95 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 ATP5LO75964 103 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 C17orf58Q2M2W7 97 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 ANKRD11Q6UB99 2663 aaPredicted RBP11.88□□□□□ -0.51
KCTD3-201ENST00000259154 IGHV3-11P01762 117 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 NEGR1Q7Z3B1 354 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 C11orf53Q8IXP5 236 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 ZNF503Q96F45 646 aa11.88□□□□□ -0.51
KCTD3-201ENST00000259154 CTRLP40313 264 aa11.87□□□□□ -0.51
KCTD3-201ENST00000259154 KLRD1Q13241 179 aa11.87□□□□□ -0.51
KCTD3-201ENST00000259154 MRPL51Q4U2R6 128 aaKnown RBP11.87□□□□□ -0.51
KCTD3-201ENST00000259154 LTAP01374 205 aa11.87□□□□□ -0.51
KCTD3-201ENST00000259154 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
KCTD3-201ENST00000259154 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
KCTD3-201ENST00000259154 BSNQ9UPA5 3926 aa11.87□□□□□ -0.51
KCTD3-201ENST00000259154 TMPRSS3P57727 454 aa11.86□□□□□ -0.51
KCTD3-201ENST00000259154 USP9YO00507 2555 aaPredicted RBP11.86□□□□□ -0.51
KCTD3-201ENST00000259154 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
KCTD3-201ENST00000259154 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
KCTD3-201ENST00000259154 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
KCTD3-201ENST00000259154 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
KCTD3-201ENST00000259154 LY6EQ16553 131 aa11.86□□□□□ -0.51
KCTD3-201ENST00000259154 GAFA1Q96PS6 74 aa11.86□□□□□ -0.51
KCTD3-201ENST00000259154 F2RL2O00254 374 aa11.85□□□□□ -0.51
KCTD3-201ENST00000259154 ZNF56Q15929 161 aa11.85□□□□□ -0.51
KCTD3-201ENST00000259154 C3orf56Q8N813 242 aa11.85□□□□□ -0.51
KCTD3-201ENST00000259154 IGKV3OR2-268A0A0C4DH90 116 aa11.85□□□□□ -0.51
KCTD3-201ENST00000259154 NDUFA4L2Q9NRX3 87 aa11.85□□□□□ -0.51
KCTD3-201ENST00000259154 NPIPB6E9PJ23 425 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 C14orf178Q8N769 122 aaPredicted RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 TNFRSF6BO95407 300 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 PF4V1P10720 104 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 TMEM155Q4W5P6 130 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 ZNF474Q6S9Z5 364 aaPredicted RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 CHTOPQ9Y3Y2 248 aaKnown RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 RPS20P60866 119 aaKnown RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 C1orf229Q6ZS94 237 aaPredicted RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 C1orf162Q8NEQ5 155 aaPredicted RBP11.84□□□□□ -0.51
KCTD3-201ENST00000259154 TMEM167AQ8TBQ9 72 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 RITA1Q96K30 269 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 VGLL1Q99990 258 aa11.84□□□□□ -0.51
KCTD3-201ENST00000259154 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 Q6AWC8 147 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 DCHS2Q6V1P9 2916 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 TM4SF5O14894 197 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 ZZEF1O43149 2961 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 RNASE4P34096 147 aaKnown RBP11.83□□□□□ -0.52
KCTD3-201ENST00000259154 KLRB1Q12918 225 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 TMEM249Q2WGJ8 235 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 NDUFS7O75251 213 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 IGLV2-8P01709 118 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 METTL26Q96S19 204 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 NPFFR1Q9GZQ6 430 aa11.83□□□□□ -0.52
KCTD3-201ENST00000259154 NXT2Q9NPJ8 142 aaKnown RBP11.83□□□□□ -0.52
KCTD3-201ENST00000259154 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
KCTD3-201ENST00000259154 ATP6V0BQ99437 205 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 A8MWV9 139 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 TSPAN13O95857 204 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 PTH2Q96A98 100 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 IGF2BP2-AS1Q96M15 143 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
KCTD3-201ENST00000259154 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
KCTD3-201ENST00000259154 IGHV3OR16-12A0A075B7B8 117 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 TRAV26-1A0A087WT03 109 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 ASCL5Q7RTU5 278 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 SPTBN4Q9H254 2564 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 C9JAW5 83 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 FAM57AQ8TBR7 257 aa11.81□□□□□ -0.52
KCTD3-201ENST00000259154 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms