RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 HES1Q14469 280 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 ARPC1AQ92747 370 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 H3BUT2 72 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 NMUP48645 174 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 NDPQ00604 133 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
CDK4-201ENST00000257904 ZNF562Q6V9R5 426 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
CDK4-201ENST00000257904 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 IGHV3-23P01764 117 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 IGHG4P01861 327 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 SRSF2Q01130 221 aaKnown RBP13.19□□□□□ -0.3
CDK4-201ENST00000257904 KLRD1Q13241 179 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 WFDC3Q8IUB2 231 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 LINC01560Q8TB33 94 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 RNF185Q96GF1 192 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 LINC01546A6NGU7 62 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 K7EP34 96 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 PRSS57Q6UWY2 283 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 PSMG3-AS1Q96PY0 264 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
CDK4-201ENST00000257904 ODF3BA8MYP8 253 aa13.18□□□□□ -0.3
CDK4-201ENST00000257904 HLA-DMBP28068 263 aa13.18□□□□□ -0.3
CDK4-201ENST00000257904 MSRB1Q9NZV6 116 aa13.18□□□□□ -0.3
CDK4-201ENST00000257904 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
CDK4-201ENST00000257904 PIFOQ8TCI5 191 aa13.17□□□□□ -0.3
CDK4-201ENST00000257904 C18orf15Q96N68 181 aa13.17□□□□□ -0.3
CDK4-201ENST00000257904 NAA38Q9BRA0 125 aaKnown RBP13.17□□□□□ -0.3
CDK4-201ENST00000257904 ORM1P02763 201 aa13.17□□□□□ -0.3
CDK4-201ENST00000257904 CTSGP08311 255 aa13.17□□□□□ -0.3
CDK4-201ENST00000257904 SAP30O75446 220 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 LY6DQ14210 128 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 NCBP2LA6PVI3 153 aaKnown RBP13.16□□□□□ -0.3
CDK4-201ENST00000257904 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 GAS8-AS1O95177 125 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 LEPP41159 167 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 RAB37Q96AX2 223 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 CSTL1Q9H114 145 aa13.16□□□□□ -0.3
CDK4-201ENST00000257904 FABP5P3A8MUU1 101 aa13.15□□□□□ -0.3
CDK4-201ENST00000257904 M0R1W7 72 aa13.15□□□□□ -0.3
CDK4-201ENST00000257904 FCER1GP30273 86 aa13.15□□□□□ -0.3
CDK4-201ENST00000257904 ODF1Q14990 250 aa13.15□□□□□ -0.3
CDK4-201ENST00000257904 NXT2Q9NPJ8 142 aaKnown RBP13.15□□□□□ -0.3
CDK4-201ENST00000257904 TACC2O95359 2948 aa13.15□□□□□ -0.31
CDK4-201ENST00000257904 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 PRTN3P24158 256 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 FBXL19-AS1Q494R0 122 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 A0A1W2PPM0 123 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 LY6HO94772 140 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 CDSNQ15517 529 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 DYNAPQ8N1N2 210 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 ITPR1Q14643 2758 aa13.14□□□□□ -0.31
CDK4-201ENST00000257904 IGKV2D-26A0A0A0MRZ7 120 aa13.13□□□□□ -0.31
CDK4-201ENST00000257904 ADORA2A-AS1P86434 159 aa13.13□□□□□ -0.31
CDK4-201ENST00000257904 LINC01559Q495D7 138 aa13.13□□□□□ -0.31
CDK4-201ENST00000257904 Q8N6K4 173 aa13.13□□□□□ -0.31
CDK4-201ENST00000257904 TPRP12270 2363 aaKnown RBP13.13□□□□□ -0.31
CDK4-201ENST00000257904 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 ERCC8Q13216 396 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 EVI2AP22794 236 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 S100A7P31151 101 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 CCDC144NLQ6NUI1 221 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 OR5A1Q8NGJ0 315 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 SPCS1Q9Y6A9 102 aa13.12□□□□□ -0.31
CDK4-201ENST00000257904 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 TM4SF20Q53R12 229 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 NBASA2RRP1 2371 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 IGHV3-35A0A0C4DH35 117 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 G3V4G9 280 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 PRSS1P07477 247 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 NEGR1Q7Z3B1 354 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 VMO1Q7Z5L0 202 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
CDK4-201ENST00000257904 IGKCP01834 107 aa13.1□□□□□ -0.31
CDK4-201ENST00000257904 SMIM13P0DJ93 91 aa13.1□□□□□ -0.31
CDK4-201ENST00000257904 GATA1P15976 413 aaPredicted RBP13.1□□□□□ -0.31
CDK4-201ENST00000257904 EBI3Q14213 229 aa13.1□□□□□ -0.31
CDK4-201ENST00000257904 ARHGAP32A7KAX9 2087 aa13.1□□□□□ -0.31
CDK4-201ENST00000257904 IGHV7-81A0A0B4J1V7 117 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 GCSHP23434 173 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 PPIFP30405 207 aaKnown RBP13.09□□□□□ -0.31
CDK4-201ENST00000257904 IL17RELQ6ZVW7 336 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 TMEM158Q8WZ71 300 aa13.09□□□□□ -0.31
CDK4-201ENST00000257904 CSMD1Q96PZ7 3565 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms