RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PRSS22Q9GZN4 317 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 SAMD13Q5VXD3 122 aa12.28□□□□□ -0.44
LRFN1-201ENST00000248668 COX19Q49B96 90 aa12.28□□□□□ -0.44
LRFN1-201ENST00000248668 CLEC19AQ6UXS0 136 aa12.28□□□□□ -0.44
LRFN1-201ENST00000248668 Q8TAT8 98 aa12.28□□□□□ -0.44
LRFN1-201ENST00000248668 CCL19Q99731 98 aa12.28□□□□□ -0.44
LRFN1-201ENST00000248668 IGLL1P15814 213 aa12.27□□□□□ -0.44
LRFN1-201ENST00000248668 HBBP68871 147 aa12.27□□□□□ -0.44
LRFN1-201ENST00000248668 LY6EQ16553 131 aa12.27□□□□□ -0.44
LRFN1-201ENST00000248668 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.44
LRFN1-201ENST00000248668 USP24Q9UPU5 2620 aa12.27□□□□□ -0.44
LRFN1-201ENST00000248668 SNAI2O43623 268 aa12.27□□□□□ -0.45
LRFN1-201ENST00000248668 PMCHL1Q16048 86 aa12.27□□□□□ -0.45
LRFN1-201ENST00000248668 OR10J3Q5JRS4 329 aa12.27□□□□□ -0.45
LRFN1-201ENST00000248668 OVOL3O00110 214 aa12.27□□□□□ -0.45
LRFN1-201ENST00000248668 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
LRFN1-201ENST00000248668 TCTAP57738 103 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 PSG3Q16557 428 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 RPL24P83731 157 aaKnown RBP12.26□□□□□ -0.45
LRFN1-201ENST00000248668 RABAC1Q9UI14 185 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 MRPS16Q9Y3D3 137 aaKnown RBP12.26□□□□□ -0.45
LRFN1-201ENST00000248668 A0A1B0GXF2 115 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 K7EQM0 130 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 PRB1P04280 392 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 CRIP1P50238 77 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 ATP5J2P56134 94 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 RBPMS2Q6ZRY4 209 aaKnown RBP12.26□□□□□ -0.45
LRFN1-201ENST00000248668 ZNF492Q9P255 531 aa12.26□□□□□ -0.45
LRFN1-201ENST00000248668 WIPF2Q8TF74 440 aaPredicted RBP12.25□□□□□ -0.45
LRFN1-201ENST00000248668 CHEK1O14757 476 aa12.25□□□□□ -0.45
LRFN1-201ENST00000248668 HSBP1O75506 76 aa12.25□□□□□ -0.45
LRFN1-201ENST00000248668 ARMS2P0C7Q2 107 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 IGHV4-38-2P0DP08 117 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 FLNBO75369 2602 aaKnown RBP12.24□□□□□ -0.45
LRFN1-201ENST00000248668 TAX1BP3O14907 124 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 ZNF138P52744 262 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 SMAD5-AS1Q9Y6J3 95 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 IGHV4-30-2A0A087WSY4 118 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 CSN1S1P47710 185 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 RNF182Q8N6D2 247 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
LRFN1-201ENST00000248668 FAM110DQ8TAY7 271 aaPredicted RBP12.24□□□□□ -0.45
LRFN1-201ENST00000248668 CSN3P07498 182 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 PSG9Q00887 426 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 VGLL1Q99990 258 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 MTORP42345 2549 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
LRFN1-201ENST00000248668 ZNF502Q8TBZ5 544 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 CCDC140Q96MF4 163 aa12.23□□□□□ -0.45
LRFN1-201ENST00000248668 ANKRD17O75179 2603 aaKnown RBP12.23□□□□□ -0.45
LRFN1-201ENST00000248668 GAGE10A6NGK3 116 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 APOHP02749 345 aaPredicted RBP12.22□□□□□ -0.45
LRFN1-201ENST00000248668 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 M0R2Z0 102 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 CT45A10P0DMU9 189 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 ATP5L2Q7Z4Y8 100 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 MCRIP2Q9BUT9 160 aaKnown RBP12.22□□□□□ -0.45
LRFN1-201ENST00000248668 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 C5orf56Q8N8D9 126 aa12.22□□□□□ -0.45
LRFN1-201ENST00000248668 EBLN2Q6P2I7 272 aa12.21□□□□□ -0.45
LRFN1-201ENST00000248668 ZNF48Q96MX3 618 aaPredicted RBP12.21□□□□□ -0.45
LRFN1-201ENST00000248668 NPIPB6E9PJ23 425 aa12.21□□□□□ -0.45
LRFN1-201ENST00000248668 ERCC8Q13216 396 aa12.21□□□□□ -0.45
LRFN1-201ENST00000248668 CT83Q5H943 113 aa12.21□□□□□ -0.45
LRFN1-201ENST00000248668 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
LRFN1-201ENST00000248668 TRAV9-2A0A087WT02 112 aa12.21□□□□□ -0.46
LRFN1-201ENST00000248668 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.46
LRFN1-201ENST00000248668 SCGB2A2Q13296 93 aa12.21□□□□□ -0.46
LRFN1-201ENST00000248668 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 SCGB2A1O75556 95 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 LCNL1Q6ZST4 164 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 hDV102S1A0JD36 115 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 ACANP16112 2415 aa12.2□□□□□ -0.46
LRFN1-201ENST00000248668 PAX8Q06710 450 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 PDE6HQ13956 83 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 RAB37Q96AX2 223 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 MAPK1IP1LQ8NDC0 245 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 SERTM2A0A1B0GWG4 89 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 SH2D1AO60880 128 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 JMJD1CQ15652 2540 aa12.19□□□□□ -0.46
LRFN1-201ENST00000248668 IGHG4P01861 327 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
LRFN1-201ENST00000248668 PIFOQ8TCI5 191 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 FBN2P35556 2912 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 A0A087X0K7 114 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 WNK1Q9H4A3 2382 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms