RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 FAM3BP58499 235 aaPredicted RBP10.73□□□□□ -0.69
SDF2-201ENST00000247020 RAB5BP61020 215 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 ZNF738Q8NE65 137 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 ZC2HC1AQ96GY0 325 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 RPP21Q9H633 154 aaKnown RBP10.73□□□□□ -0.69
SDF2-201ENST00000247020 TRAV2A0A0B4J234 112 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 A8MWL6 223 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 COX19Q49B96 90 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 RAX2Q96IS3 184 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 LINC00477Q96M19 166 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 CITED2Q99967 270 aaPredicted RBP10.72□□□□□ -0.69
SDF2-201ENST00000247020 VGLL1Q99990 258 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 MTORP42345 2549 aa10.72□□□□□ -0.69
SDF2-201ENST00000247020 NSD1Q96L73 2696 aaPredicted RBP10.71□□□□□ -0.69
SDF2-201ENST00000247020 TRBV7-9A0A0J9YWB2 115 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 EDN2P20800 178 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 ZNF138P52744 262 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 PAFAH1B2P68402 229 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 DLX4Q92988 240 aaPredicted RBP10.71□□□□□ -0.69
SDF2-201ENST00000247020 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 MS4A6AQ9H2W1 248 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 SIGLEC8Q9NYZ4 499 aa10.71□□□□□ -0.69
SDF2-201ENST00000247020 K7EQG2 157 aa10.7□□□□□ -0.7
SDF2-201ENST00000247020 CCL24O00175 119 aa10.7□□□□□ -0.7
SDF2-201ENST00000247020 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
SDF2-201ENST00000247020 LINC00322Q6ZN03 302 aaPredicted RBP10.7□□□□□ -0.7
SDF2-201ENST00000247020 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
SDF2-201ENST00000247020 C8orf49Q96NF6 230 aa10.7□□□□□ -0.7
SDF2-201ENST00000247020 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
SDF2-201ENST00000247020 HIVEP1P15822 2718 aa10.7□□□□□ -0.7
SDF2-201ENST00000247020 IZUMO1RA6ND01 250 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 CSN3P07498 182 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
SDF2-201ENST00000247020 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 ADAMTSL5Q6ZMM2 481 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 SAV1Q9H4B6 383 aaPredicted RBP10.69□□□□□ -0.7
SDF2-201ENST00000247020 NAT8BQ9UHF3 227 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 ERCC8Q13216 396 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 NDUFA11Q86Y39 141 aa10.69□□□□□ -0.7
SDF2-201ENST00000247020 CUBNO60494 3623 aa10.68□□□□□ -0.7
SDF2-201ENST00000247020 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
SDF2-201ENST00000247020 CRIP1P50238 77 aa10.68□□□□□ -0.7
SDF2-201ENST00000247020 FOXA3P55318 350 aaPredicted RBP10.68□□□□□ -0.7
SDF2-201ENST00000247020 OR8A1Q8NGG7 326 aa10.68□□□□□ -0.7
SDF2-201ENST00000247020 Q8TAT8 98 aa10.68□□□□□ -0.7
SDF2-201ENST00000247020 ASCL2Q99929 193 aa10.68□□□□□ -0.7
SDF2-201ENST00000247020 IGKV3-7A0A075B6H7 116 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 XKRY2A2RUG3 117 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
SDF2-201ENST00000247020 Q6AWC8 147 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 C11orf44Q8N8P7 122 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 NEU1Q99519 415 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 GPR61Q9BZJ8 451 aa10.67□□□□□ -0.7
SDF2-201ENST00000247020 A0A1W2PRX2 142 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 ADARB2-AS1A8MUL3 147 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 SH2D1AO60880 128 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 CA1P00915 261 aaPredicted RBP10.66□□□□□ -0.7
SDF2-201ENST00000247020 MT-ND6P03923 174 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 HIST1H1AQ02539 215 aaPredicted RBP10.66□□□□□ -0.7
SDF2-201ENST00000247020 WDR73Q6P4I2 378 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 OR2D3Q8NGH3 330 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 NF1P21359 2839 aa10.66□□□□□ -0.7
SDF2-201ENST00000247020 FN1P02751 2386 aaKnown RBP10.66□□□□□ -0.7
SDF2-201ENST00000247020 HIGD1CA8MV81 97 aa10.65□□□□□ -0.7
SDF2-201ENST00000247020 TRGC2P03986 189 aa10.65□□□□□ -0.7
SDF2-201ENST00000247020 ACTL10Q5JWF8 245 aa10.65□□□□□ -0.7
SDF2-201ENST00000247020 RBPMS2Q6ZRY4 209 aaKnown RBP10.65□□□□□ -0.7
SDF2-201ENST00000247020 NUP35Q8NFH5 326 aa10.65□□□□□ -0.7
SDF2-201ENST00000247020 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
SDF2-201ENST00000247020 GNB1LQ9BYB4 327 aa10.65□□□□□ -0.7
SDF2-201ENST00000247020 PHOX2AO14813 284 aa10.65□□□□□ -0.71
SDF2-201ENST00000247020 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.71
SDF2-201ENST00000247020 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.71
SDF2-201ENST00000247020 TMEM189A5PLL7 270 aa10.64□□□□□ -0.71
SDF2-201ENST00000247020 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
SDF2-201ENST00000247020 CRISP2P16562 243 aa10.64□□□□□ -0.71
SDF2-201ENST00000247020 TCL1AP56279 114 aa10.64□□□□□ -0.71
SDF2-201ENST00000247020 LINC01559Q495D7 138 aa10.64□□□□□ -0.71
SDF2-201ENST00000247020 WFDC3Q8IUB2 231 aa10.64□□□□□ -0.71
SDF2-201ENST00000247020 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
SDF2-201ENST00000247020 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
SDF2-201ENST00000247020 HLA-DQA1P01909 254 aa10.63□□□□□ -0.71
SDF2-201ENST00000247020 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
SDF2-201ENST00000247020 ZNF80P51504 273 aaPredicted RBP10.63□□□□□ -0.71
SDF2-201ENST00000247020 PSMG4Q5JS54 123 aa10.63□□□□□ -0.71
SDF2-201ENST00000247020 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
SDF2-201ENST00000247020 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
SDF2-201ENST00000247020 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
SDF2-201ENST00000247020 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms