RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 RHOGP84095 191 aa13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 C11orf44Q8N8P7 122 aa13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 OR4F17Q8NGA8 305 aa13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 OR2D3Q8NGH3 330 aa13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 LINC01006Q8NI28 216 aa13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 ZNF785A8K8V0 405 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 F8W735 103 aaPredicted RBP13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 GNG7O60262 68 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 TRGV3P03979 118 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 CFHR3Q02985 330 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 SIGLEC15Q6ZMC9 328 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 NPIPB6E9PJ23 425 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 MFAP4P55083 255 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 HBBP68871 147 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 LBHQ53QV2 105 aaPredicted RBP13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 ASCL2Q99929 193 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 C20orf144Q9BQM9 153 aa13.05□□□□□ -0.32
CDKN1A-201ENST00000244741 NTF3P20783 257 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 ZNF414Q96IQ9 312 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 SNHG12Q9BXW3 62 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 GFRA4Q9GZZ7 299 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
CDKN1A-201ENST00000244741 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 IGHV3-11P01762 117 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 C3orf79P0CE67 100 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 RBPMS2Q6ZRY4 209 aaKnown RBP13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 PRIMA1Q86XR5 153 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 KLHDC1Q8N7A1 406 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 RPLP1P05386 114 aaKnown RBP13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 RAB9AP51151 201 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 Q56UQ5 140 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 C16orf54Q6UWD8 224 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
CDKN1A-201ENST00000244741 IGHG4P01861 327 aa13.02□□□□□ -0.33
CDKN1A-201ENST00000244741 LYPD1Q8N2G4 141 aa13.02□□□□□ -0.33
CDKN1A-201ENST00000244741 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.33
CDKN1A-201ENST00000244741 C21orf62Q9NYP8 219 aa13.02□□□□□ -0.33
CDKN1A-201ENST00000244741 M0R3E3 92 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 PSMB8P28062 276 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 MIEN1Q9BRT3 115 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 PSG8Q9UQ74 426 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 FAM231BA6NCW3 169 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 OR4B1Q8NGF8 309 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 URB1-AS1Q96HZ7 61 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 C16orf95Q9H693 158 aa13.01□□□□□ -0.33
CDKN1A-201ENST00000244741 HSBP1O75506 76 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 PSG3Q16557 428 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 RNASEKQ6P5S7 137 aaKnown RBP13□□□□□ -0.33
CDKN1A-201ENST00000244741 THYN1Q9P016 225 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 OR2T8A6NH00 312 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 RAB4AP20338 218 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
CDKN1A-201ENST00000244741 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 BORCS7Q96B45 105 aa13□□□□□ -0.33
CDKN1A-201ENST00000244741 IGHV3-35A0A0C4DH35 117 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 M0R143 59 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 NDUFA7O95182 113 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 CRIP1P50238 77 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 C18orf65Q6ZTR6 163 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 ZNF580Q9UK33 172 aa12.99□□□□□ -0.33
CDKN1A-201ENST00000244741 K7EQM0 130 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 M0R2Z0 102 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 CTSGP08311 255 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 TRBV12-3P01733 135 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 CD28P10747 220 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 S100A7AQ86SG5 101 aa12.98□□□□□ -0.33
CDKN1A-201ENST00000244741 CLPSL1A2RUU4 121 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 M0QZ24 198 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 CLEC3BP05452 202 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 GPR183P32249 361 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 CTRLP40313 264 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 PDE6HQ13956 83 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 LCN12Q6JVE5 192 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 EBLN2Q6P2I7 272 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 CCDC140Q96MF4 163 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 FOXE3Q13461 319 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 C8orf49Q96NF6 230 aa12.97□□□□□ -0.33
CDKN1A-201ENST00000244741 COL6A5A8TX70 2615 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 LOC102724200A0A096LPH7 203 aaPredicted RBP12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 FAM223BA6NKX1 122 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 H3BUA1 57 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 CHEK1O14757 476 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 PROK1P58294 105 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms