RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SMAD5-AS1Q9Y6J3 95 aa12.07□□□□□ -0.48
DDX55-201ENST00000238146 NDUFA3O95167 84 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 TNFRSF6BO95407 300 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 ORM1P02763 201 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 NPBQ8NG41 125 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 ONECUT1Q9UBC0 465 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 IGHV3-23P01764 117 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 PRSS1P07477 247 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 CHAC1Q9BUX1 264 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 POLEQ07864 2286 aa12.06□□□□□ -0.48
DDX55-201ENST00000238146 APC2O95996 2303 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 EVI2AP22794 236 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 C21orf62Q9NYP8 219 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 K7ERJ3 54 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 SMIM17P0DL12 118 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 GATA1P15976 413 aaPredicted RBP12.05□□□□□ -0.48
DDX55-201ENST00000238146 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
DDX55-201ENST00000238146 DPM3Q9P2X0 92 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 CSMD1Q96PZ7 3565 aa12.05□□□□□ -0.48
DDX55-201ENST00000238146 B9A039 149 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 IGKCP01834 107 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 SRSF2Q01130 221 aaKnown RBP12.04□□□□□ -0.48
DDX55-201ENST00000238146 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 PHLDA1Q8WV24 401 aaPredicted RBP12.04□□□□□ -0.48
DDX55-201ENST00000238146 TRBV25-1A0A075B6N4 114 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 GTSCR1Q86UQ5 136 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 BSNQ9UPA5 3926 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 NDPQ00604 133 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 TMEM158Q8WZ71 300 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 FOXC2Q99958 501 aa12.04□□□□□ -0.48
DDX55-201ENST00000238146 PPIFP30405 207 aaKnown RBP12.03□□□□□ -0.48
DDX55-201ENST00000238146 HES1Q14469 280 aa12.03□□□□□ -0.48
DDX55-201ENST00000238146 TEX48A0A1B0GUV7 120 aa12.03□□□□□ -0.48
DDX55-201ENST00000238146 CTSGP08311 255 aa12.03□□□□□ -0.48
DDX55-201ENST00000238146 RPL24P83731 157 aaKnown RBP12.03□□□□□ -0.48
DDX55-201ENST00000238146 ERCC8Q13216 396 aa12.03□□□□□ -0.48
DDX55-201ENST00000238146 ZC2HC1BQ5TFG8 222 aa12.03□□□□□ -0.48
DDX55-201ENST00000238146 DYNAPQ8N1N2 210 aa12.03□□□□□ -0.48
DDX55-201ENST00000238146 ATMQ13315 3056 aa12.02□□□□□ -0.48
DDX55-201ENST00000238146 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 TTC9CQ8N5M4 171 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 ARPC1AQ92747 370 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 TM2D2Q9BX73 214 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 DPM2O94777 84 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 LY6G5BQ8NDX9 201 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.49
DDX55-201ENST00000238146 GVINP1Q7Z2Y8 2422 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 IGLV2-18A0A075B6J9 118 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 TMEM8BA6NDV4 472 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 PRAC2D3DTV9 90 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 KLRD1Q13241 179 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 LINC01559Q495D7 138 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
DDX55-201ENST00000238146 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 ATP5LO75964 103 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 CEND1Q8N111 149 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 Q8N8P6 123 aa12.01□□□□□ -0.49
DDX55-201ENST00000238146 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
DDX55-201ENST00000238146 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12□□□□□ -0.49
DDX55-201ENST00000238146 K7EMI3 77 aa12□□□□□ -0.49
DDX55-201ENST00000238146 ACACAQ13085 2346 aa12□□□□□ -0.49
DDX55-201ENST00000238146 WNK2Q9Y3S1 2297 aa12□□□□□ -0.49
DDX55-201ENST00000238146 TRAV40A0A0B4J280 105 aa12□□□□□ -0.49
DDX55-201ENST00000238146 IGHV3-35A0A0C4DH35 117 aa12□□□□□ -0.49
DDX55-201ENST00000238146 TMEM160Q9NX00 188 aa12□□□□□ -0.49
DDX55-201ENST00000238146 CD3EP07766 207 aa11.99□□□□□ -0.49
DDX55-201ENST00000238146 MAPKAPK5-AS1Q8N8E1 139 aa11.99□□□□□ -0.49
DDX55-201ENST00000238146 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
DDX55-201ENST00000238146 IGKV3D-20A0A0C4DH25 116 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
DDX55-201ENST00000238146 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 SRSF1Q07955 248 aaKnown RBP eCLIP11.98□□□□□ -0.499e-8■■■□□ 16.2
DDX55-201ENST00000238146 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
DDX55-201ENST00000238146 IL17RELQ6ZVW7 336 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 PIEZO2Q9H5I5 2752 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 E9PLD3 99 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 TRGV3P03979 118 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 C11orf21Q9P2W6 132 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 AKAP13Q12802 2813 aa11.98□□□□□ -0.49
DDX55-201ENST00000238146 RNF182Q8N6D2 247 aa11.97□□□□□ -0.49
DDX55-201ENST00000238146 ODF3BA8MYP8 253 aa11.97□□□□□ -0.49
DDX55-201ENST00000238146 IGLL5B9A064 214 aa11.97□□□□□ -0.49
DDX55-201ENST00000238146 Q8NA96 180 aa11.97□□□□□ -0.49
DDX55-201ENST00000238146 LY6HO94772 140 aa11.96□□□□□ -0.5
DDX55-201ENST00000238146 FOXI2Q6ZQN5 318 aa11.96□□□□□ -0.5
DDX55-201ENST00000238146 NRACQ8N912 160 aa11.96□□□□□ -0.5
DDX55-201ENST00000238146 MYOZ3Q8TDC0 251 aa11.96□□□□□ -0.5
DDX55-201ENST00000238146 TRAV26-2A0A0B4J265 109 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 SCGB2A1O75556 95 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 WFDC2Q14508 124 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 LAGE3Q14657 143 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 SAMD13Q5VXD3 122 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 DCHS2Q6V1P9 2916 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 ABCA4P78363 2273 aa11.95□□□□□ -0.5
DDX55-201ENST00000238146 RBAKDNA6NC62 111 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms