RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 GTSF1Q8WW33 167 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
PAF1-201ENST00000221265 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
PAF1-201ENST00000221265 CLPSL1A2RUU4 121 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 INAFM1C9JVW0 142 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 CAMPP49913 170 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 TDRG1Q3Y452 100 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 SIGLEC15Q6ZMC9 328 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 TEX43Q6ZNM6 134 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 PRNTQ86SH4 94 aa11.63□□□□□ -0.55
PAF1-201ENST00000221265 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
PAF1-201ENST00000221265 A8MWL6 223 aa11.62□□□□□ -0.55
PAF1-201ENST00000221265 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
PAF1-201ENST00000221265 AMTP48728 403 aa11.62□□□□□ -0.55
PAF1-201ENST00000221265 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
PAF1-201ENST00000221265 DAZAP1Q96EP5 407 aaKnown RBP11.62□□□□□ -0.55
PAF1-201ENST00000221265 NRN1Q9NPD7 142 aa11.62□□□□□ -0.55
PAF1-201ENST00000221265 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
PAF1-201ENST00000221265 A0A0G2JLM5 398 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 ZNF785A8K8V0 405 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 ZNF324O75467 553 aaPredicted RBP11.61□□□□□ -0.55
PAF1-201ENST00000221265 PMCHP20382 165 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 Q8N976 141 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 IGHV3OR16-13A0A075B7E8 117 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 IGHV3-74A0A0B4J1X5 117 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 KLF5Q13887 457 aaPredicted RBP11.61□□□□□ -0.55
PAF1-201ENST00000221265 PRR31Q5SQ13 230 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 UNQ9165/PRO28630Q6UXU0 137 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 PGLYRP4Q96LB8 373 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 ATP6V0BQ99437 205 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
PAF1-201ENST00000221265 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
PAF1-201ENST00000221265 IGHV3-49A0A0A0MS15 119 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
PAF1-201ENST00000221265 PRB4P10163 310 aaPredicted RBP11.6□□□□□ -0.55
PAF1-201ENST00000221265 C16orf54Q6UWD8 224 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 NIT1Q86X76 327 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 LYPD1Q8N2G4 141 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 GFRA4Q9GZZ7 299 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
PAF1-201ENST00000221265 KRTDAPP60985 99 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 HBBP68871 147 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 RELQ04864 619 aaPredicted RBP11.59□□□□□ -0.55
PAF1-201ENST00000221265 FOXE3Q13461 319 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 ZMAT5Q9UDW3 170 aaKnown RBP11.59□□□□□ -0.55
PAF1-201ENST00000221265 TMEM89A2RUT3 159 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 RNASE1P07998 156 aaKnown RBP11.59□□□□□ -0.55
PAF1-201ENST00000221265 HILS1P60008 231 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
PAF1-201ENST00000221265 KLHDC1Q8N7A1 406 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 MYOZ3Q8TDC0 251 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
PAF1-201ENST00000221265 TMEM190Q8WZ59 177 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 ASCL2Q99929 193 aa11.59□□□□□ -0.55
PAF1-201ENST00000221265 ELANEP08246 267 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 C18orf65Q6ZTR6 163 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 ZC2HC1AQ96GY0 325 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 A0A1B0GV90 55 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 FAM231BA6NCW3 169 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 M0R3E3 92 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 SRSF2Q01130 221 aaKnown RBP11.58□□□□□ -0.56
PAF1-201ENST00000221265 RNF152Q8N8N0 203 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 PEF1Q9UBV8 284 aaKnown RBP11.58□□□□□ -0.56
PAF1-201ENST00000221265 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 ZFP30Q9Y2G7 519 aa11.58□□□□□ -0.56
PAF1-201ENST00000221265 FOSL1P15407 271 aa11.57□□□□□ -0.56
PAF1-201ENST00000221265 PSG3Q16557 428 aa11.57□□□□□ -0.56
PAF1-201ENST00000221265 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
PAF1-201ENST00000221265 SMAD5-AS1Q9Y6J3 95 aa11.57□□□□□ -0.56
PAF1-201ENST00000221265 BUB3O43684 328 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 NTF3P20783 257 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 S100A7AQ86SG5 101 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 K7EQM0 130 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 NDUFA4O00483 81 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 EREGO14944 169 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
PAF1-201ENST00000221265 PDE6HQ13956 83 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
PAF1-201ENST00000221265 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 PAM16Q9Y3D7 125 aa11.56□□□□□ -0.56
PAF1-201ENST00000221265 CRIP1P50238 77 aa11.55□□□□□ -0.56
PAF1-201ENST00000221265 LINC00469Q8N7U9 141 aa11.55□□□□□ -0.56
PAF1-201ENST00000221265 URB1-AS1Q96HZ7 61 aa11.55□□□□□ -0.56
PAF1-201ENST00000221265 METTL26Q96S19 204 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms