RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 ZNF138P52744 262 aa13.87□□□□□ -0.19
SLC22A4-201ENST00000200652 SSTP61278 116 aa13.87□□□□□ -0.19
SLC22A4-201ENST00000200652 SRSF2Q01130 221 aaKnown RBP13.87□□□□□ -0.19
SLC22A4-201ENST00000200652 CLEC5AQ9NY25 188 aa13.87□□□□□ -0.19
SLC22A4-201ENST00000200652 FABP5P3A8MUU1 101 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 SLC25A16P16260 332 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 GATA3P23771 443 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 CTRLP40313 264 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 LBHQ53QV2 105 aaPredicted RBP13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 UNQ9165/PRO28630Q6UXU0 137 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 USMG5Q96IX5 58 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 PSMG3-AS1Q96PY0 264 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 AGPAT4-IT1Q9H0P7 198 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 KLK15Q9H2R5 256 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 IGLC6P0CF74 106 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 IL17RELQ6ZVW7 336 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 GLMPQ8WWB7 406 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 MRPL53Q96EL3 112 aaKnown RBP13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 C2orf88Q9BSF0 95 aa13.86□□□□□ -0.19
SLC22A4-201ENST00000200652 MUC21A0A0G2JKD1 596 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 MUC21A0A140T8X8 626 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 NDUFA4O00483 81 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 EREGO14944 169 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 MUC21Q5SSG8 566 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 DMRTA1Q5VZB9 504 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 ZNF705AQ6ZN79 300 aaPredicted RBP13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 FER1L6-AS1Q8NA97 138 aa13.85□□□□□ -0.19
SLC22A4-201ENST00000200652 IGHV3-11P01762 117 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 ORM1P02763 201 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 CSN3P07498 182 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 PF4V1P10720 104 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 SPATA45Q537H7 98 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 SMAD7O15105 426 aaKnown RBP13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 FAM104BQ5XKR9 115 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 SNHG12Q9BXW3 62 aa13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 ZMAT5Q9UDW3 170 aaKnown RBP13.84□□□□□ -0.19
SLC22A4-201ENST00000200652 A0A096LNT2 108 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 A0A1B0GV90 55 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 UTP20O75691 2785 aaKnown RBP13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 RAB4AP20338 218 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 SRSF1Q07955 248 aaKnown RBP eCLIP13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 ATOH7Q8N100 152 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 LINC01356Q8N9X3 169 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 USP24Q9UPU5 2620 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 IGLV1-40P01703 118 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 COX6B1P14854 86 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 LINC00173Q6ZV60 143 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 SPATA12Q7Z6I5 190 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 AMN1Q8IY45 258 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 TMEM70Q9BUB7 260 aa13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.83□□□□□ -0.2
SLC22A4-201ENST00000200652 LEPROTL1O95214 131 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 LINC01559Q495D7 138 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 LCNL1Q6ZST4 164 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 OR4X2Q8NGF9 303 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 C16orf92Q96LL3 132 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 U3KQK5 164 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 CELSR2Q9HCU4 2923 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 TWIST1Q15672 202 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 CYB5R2Q6BCY4 276 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 C9orf47Q6ZRZ4 202 aa13.82□□□□□ -0.2
SLC22A4-201ENST00000200652 CRYBG3Q68DQ2 2970 aa13.81□□□□□ -0.2
SLC22A4-201ENST00000200652 D6R8Y8 96 aa13.81□□□□□ -0.2
SLC22A4-201ENST00000200652 M0R143 59 aa13.81□□□□□ -0.2
SLC22A4-201ENST00000200652 CFHR3Q02985 330 aa13.81□□□□□ -0.2
SLC22A4-201ENST00000200652 ZNF843Q8N446 348 aa13.81□□□□□ -0.2
SLC22A4-201ENST00000200652 OR5AL1P0C617 328 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 DEFB112Q30KQ8 113 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 MYO18BQ8IUG5 2567 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 A1L4Q6 167 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 CRXO43186 299 aaPredicted RBP13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 MAJINQ3KP22 176 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 MRPL51Q4U2R6 128 aaKnown RBP13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 C9orf139Q6ZV77 190 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 GPHB5Q86YW7 130 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
SLC22A4-201ENST00000200652 IGHV4-59P01825 116 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 HIST1H1AQ02539 215 aaPredicted RBP13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 CNFNQ9BYD5 112 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 NPFFR1Q9GZQ6 430 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 AP5S1Q9NUS5 200 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 PPP1R14DQ9NXH3 145 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 C11orf21Q9P2W6 132 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 IGKV3D-20A0A0C4DH25 116 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 A0A0G2JLM5 398 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 ORMDL3Q8N138 153 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 MAPK1IP1LQ8NDC0 245 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 PRELID3AQ96N28 172 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 MSRB1Q9NZV6 116 aa13.79□□□□□ -0.2
SLC22A4-201ENST00000200652 IGLC3P0DOY3 106 aa13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 MAP1AP78559 2803 aaPredicted RBP13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 TGFAP01135 160 aa13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 IFI27P40305 119 aaPredicted RBP13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 TMEM95Q3KNT9 176 aa13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 FA2HQ7L5A8 372 aa13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 TMEM191AQ9H0A3 160 aa13.78□□□□□ -0.2
SLC22A4-201ENST00000200652 TRAV9-2A0A087WT02 112 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms