RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Pef1Q8BFY6 275 aa10.09□□□□□ -0.79
Scn8a-208ENSMUST00000200963 Olfr559Q8VH14 318 aa10.09□□□□□ -0.79
Scn8a-208ENSMUST00000200963 Ntn3Q9R1A3 580 aa10.09□□□□□ -0.79
Scn8a-208ENSMUST00000200963 Col13a1Q9R1N9 751 aa10.09□□□□□ -0.79
Scn8a-208ENSMUST00000200963 Gm36368A0A1D5RLK8 91 aa10.09□□□□□ -0.79
Scn8a-208ENSMUST00000200963 Cxcl1P12850 96 aa10.09□□□□□ -0.79
Scn8a-208ENSMUST00000200963 Phxr1P15973 60 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 SftpcP21841 193 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 PilraQ2YFS3 302 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 A3galt2Q3V1N9 370 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Rtn4rQ99PI8 473 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 SpxD3Z752 116 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 D1Ertd622eQ8VEB3 207 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ighv7-3A0A075B5R2 120 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ighv6-3A0A075B5T2 118 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 BC024063A0A1W2P7G7 749 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 AgmatA2AS89 358 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Smim13E9Q942 88 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Rnd3P61588 244 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Tmem160Q9D938 188 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm17727E9Q4V7 109 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 D430019H16RikJ3QPM6 83 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 S100a8P27005 89 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Q0VG49 157 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ifi27Q8C6G0 260 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Klk10Q99M20 278 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Necap2Q9D1J1 266 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 1700015F17RikD3YUK8 150 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Il9P15247 144 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Snrpd3P62320 126 aaKnown RBP10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Fam3dP97805 223 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Arl6ip6Q8BH07 226 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Znf641Q8BZ34 422 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Prss41Q920S2 322 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Foxj2Q9ES18 565 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 CcsQ9WU84 274 aa10.08□□□□□ -0.8
Scn8a-208ENSMUST00000200963 MscO88940 201 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Rps11P62281 158 aaKnown RBP10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Zfp954Q7TNU5 416 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Bhlha15Q9QYC3 197 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Frmpd3A0A140LIW3 1774 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm42543A0A0G2JET4 117 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Trav13n-4A0A0G2JG01 110 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Hmga2P52927 108 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Cd59bP58019 129 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Hhipl1Q14DK5 791 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gtf3aQ8VHT7 364 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ssbp3Q9D032 388 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ttc3O88196 1979 aaKnown RBP10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Igsf23B2RTN2 239 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Sfrp2P97299 295 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Psg17Q62056 475 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Olfr1228Q8VGM9 323 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Olfr1192-ps1A0A1L1SRD7 309 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 P01783 136 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ssty1P13675 232 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Khdc1cQ4KL78 166 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 4930412O13RikQ9D5M9 106 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 AY761184Q9D848 116 aa10.07□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Sumo2P61957 95 aaKnown RBP10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Olfr322Q5NCC8 327 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Defa-rs10Q64263 91 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 TifabQ8JZM6 147 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Ifitm2Q99J93 144 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Bpifa5Q9CQX3 270 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm45844A0A1B0GRQ2 137 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 9830107B12RikD3Z5D6 160 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Tmem139E9PX92 214 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm9945Q8BNZ3 91 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 CrhQ8CIT0 187 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 PaxxQ8K0Y7 205 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 RetnlgQ8K426 117 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 SdhdQ9CXV1 159 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Cxcl10P17515 98 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Vsig8Q6P3A4 417 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Olfr1382Q7TQT3 311 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Olfr275Q7TS18 319 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Zfp119bQ8K0G9 543 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 SvilQ8K4L3 2170 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 A630076J17RikJ3QQ32 107 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 GaptQ8CB93 157 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Sdf2l1Q9ESP1 221 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm16442D3YZG3 307 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 GgnQ80WJ1 673 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Crispld2Q8BZQ2 495 aa10.06□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Trav7-5A0A0G2JFX6 112 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 H2-M5A7VMS3 348 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 GfralQ6SJE0 393 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Sfxn3Q91V61 321 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Arid1aA2BH40 2283 aaKnown RBP10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Adrb3P25962 400 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 HhexP43120 271 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Nup35Q8R4R6 325 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Tlcd2Q8VC26 310 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Pf4Q9Z126 105 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Zfp983E9PUT0 460 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm6970F7DCP6 221 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm21913J3KML9 361 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 Gm21776J3QPJ5 361 aa10.05□□□□□ -0.8
Scn8a-208ENSMUST00000200963 P01801 115 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms