RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 NotoQ5TIS6 240 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Bud31Q6PGH1 103 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr917Q7TRC3 309 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Btf3l4Q9CQH7 158 aaKnown RBP10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Bpifa5Q9CQX3 270 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 2200002J24RikQ9D807 110 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 TectaO08523 2155 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Zfp931A2AHM2 298 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr872E9PVW2 323 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm10020E9QAZ2 204 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Iqcf6G3UWF2 157 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 3110021N24RikJ3QMN2 152 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 P01674 108 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 P01796 113 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 P01797 113 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 P01799 113 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Oprk1P33534 380 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Crebl2Q32M00 123 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Arrdc5Q497K5 325 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Btf3Q64152 204 aaKnown RBP10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Spcs3Q6ZWQ7 180 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Harbi1Q8BR93 349 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 MavsQ8VCF0 503 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr470Q8VF65 314 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr344Q8VFP9 309 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Rpl15Q9CZM2 204 aaKnown RBP10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 VsirQ9D659 308 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Znf22Q9ERU3 237 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 Tnfrsf13bQ9ET35 249 aa10.73□□□□□ -0.69
Nup88-203ENSMUST00000108531 PkdrejQ9Z0T6 2126 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 SncaO55042 140 aaKnown RBP10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Hoxb2P0C1T1 354 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Cnep1r1Q3UJ81 125 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Pcgf1Q8R023 259 aaKnown RBP10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mrps11Q9DCA2 191 aaKnown RBP10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Cml1Q9JIZ0 222 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 MgaA2AWL7 3003 aaKnown RBP10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Heatr1G3X9B1 2143 aaKnown RBP10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 9130204L05RikG3UWB8 92 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Gm28051J3QMA2 81 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mbd3l2Q3UXB0 228 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1382Q7TQT3 311 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Dppa1Q810Y7 116 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Megf9Q8BH27 600 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr736Q8VFT6 312 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr124Q8VGW6 315 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Scgb1b27Q91WB5 92 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Derl1Q99J56 251 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Fancd2osQ9D4K4 178 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Btbd17Q9DB72 478 aa10.72□□□□□ -0.69
Nup88-203ENSMUST00000108531 Igkv6-15A0A140T8M5 115 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr1248A0A1L1SSZ5 307 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Foxi3E0CZH3 425 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Tm4sf19E9Q9H8 206 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Vmn1r78K7N608 313 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 P04212 136 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 RhodP97348 210 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Pax5Q02650 391 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Arl11Q6P3A9 176 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Vmn1r26Q8R2D7 339 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Znhit1Q8R331 154 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Mob3bQ8VE04 216 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 HpxQ91X72 460 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Usf3B2RUQ2 2221 aa10.71□□□□□ -0.69
Nup88-203ENSMUST00000108531 Olfr779E9PUS9 130 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Gm6665F6Y363 85 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Lbhd2G3UW55 114 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 A630076J17RikJ3QQ32 107 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 MyadmO35682 320 aaKnown RBP10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ptbp1P17225 527 aaKnown RBP10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Olfr143P34985 313 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Sfrp2P97299 295 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ctsll3Q3ULP7 331 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 MyocosQ3UWS6 143 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Tmem40Q4FJU9 225 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Prdx2Q61171 198 aaKnown RBP10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Smug1Q6P5C5 279 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Prb1Q91X93 504 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Rab31Q921E2 194 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Hsd17b6Q9R092 317 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Rgs11Q9Z2H1 443 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Bod1lE9Q6J5 3032 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Esp6A8R0U0 136 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 3110082J24RikF6Z6Z2 108 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Lgals9O08573 353 aaKnown RBP10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ifna4P07351 186 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Dynlt3P56387 116 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 CenptQ3TJM4 515 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Zfp872Q3UVL3 465 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Rhox10Q4TU83 196 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 AgerQ62151 402 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ndufs8Q8K3J1 212 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 GrhprQ91Z53 328 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Ms4a6bQ99N09 244 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 H2afb1Q9CQ70 111 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Fhl3Q9R059 289 aa10.7□□□□□ -0.7
Nup88-203ENSMUST00000108531 Trbv1A0A0B4J1G7 116 aa10.69□□□□□ -0.7
Nup88-203ENSMUST00000108531 Zfp976E9Q981 636 aa10.69□□□□□ -0.7
Nup88-203ENSMUST00000108531 Vamp3P63024 103 aa10.69□□□□□ -0.7
Nup88-203ENSMUST00000108531 Klf14Q19A41 325 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 164.3 ms