RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Ly75Q60767 1723 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Gm20532G3UXR8 106 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Mrgprb2Q3KNA1 338 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Olfr1202Q8VF98 309 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 H2afb1Q9CQ70 111 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Leprotl1Q9CQ74 131 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Gm4881A0A140LIR9 352 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 A630076J17RikJ3QQ32 107 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Foxa2P35583 459 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Tmem40Q4FJU9 225 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Olfr553Q7TRS6 326 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Slc35e4Q8K3D6 351 aa12.6□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Gm45623A0A1B0GSF6 103 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 H2-M5A7VMS3 348 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Cr2P19070 1025 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Acsm5Q8BGA8 578 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Ndufaf3Q9JKL4 185 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Dnase2bQ9QY48 354 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Sfrp4Q9Z1N6 351 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Gm21874J3QNZ6 232 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 P01657 111 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Olfr25Q7TRD6 313 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Arl14epQ8BIX3 276 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Spsb4Q8R5B6 273 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Pbp2Q8VIN1 187 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Defb8Q91V82 60 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 2900055J20RikQ9D6G3 140 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 RprmQ9JJ72 109 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Sumo3Q9Z172 110 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Igkv9-124A0A0G2JDR3 117 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Gm45736A0A1B0GS18 427 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Cd5P13379 494 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Olfr195Q8VGQ6 308 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Loxl4Q924C6 757 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Mettl26Q9DCS2 204 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Bhlha15Q9QYC3 197 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Ighv1-47A0A0A6YY41 117 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 BC030500E9Q6W0 185 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Mrpl20Q9CQL4 149 aa12.59□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Scgb1b24B1B0N6 92 aa12.58□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Ucp2P70406 309 aa12.58□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Psg17Q62056 475 aa12.58□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Pef1Q8BFY6 275 aa12.58□□□□□ -0.39
Pcdh20-201ENSMUST00000061628 Gm6525A0A0A6YW33 106 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 CrxO54751 299 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Plppr1Q8BFZ2 325 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Gatad1Q920S3 266 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Frem3Q5H8B9 2123 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Sipa1l3G3X9J0 1776 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Treml4Q3LRV9 263 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Duxbl2Q7TNE6 350 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Fam213bQ9DB60 201 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Igkv6-25A0A140T8N7 115 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 D430019H16RikJ3QPM6 83 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Sfrp2P97299 295 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Olfr1336Q8VGH5 314 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Shank3Q4ACU6 1730 aa12.58□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Sc5dO88822 299 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Olfr823Q7TRH2 315 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Gm21900J3QP38 180 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Il12rb1Q60837 738 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Vsig8Q6P3A4 417 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Olfr965Q7TRA7 312 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Olfr904Q7TRC9 310 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Znf641Q8BZ34 422 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Tbx19Q99ME7 446 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Nkg7Q99PA5 165 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Q9DAZ5 108 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Col13a1Q9R1N9 751 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Aqp7O54794 303 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 P18530 117 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 NrtnP97463 195 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Arl14eplQ3UKZ7 152 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Hide1Q75VT8 222 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Try10Q792Z1 246 aaKnown RBP12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Ankrd55Q8BLD6 626 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 March11Q8CBH7 400 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Scnm1Q8K136 229 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 3100002H09RikQ9CXW6 140 aa12.57□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Adamts17E9Q4D1 1122 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Ccl11P48298 97 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Lhfpl4Q5U4E0 247 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Bud31Q6PGH1 103 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Tmem140Q8BGY5 185 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Dcaf12l1Q8CBW4 501 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Fam241aQ9CZL2 131 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Olfr961Q9EQ84 314 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Efemp2Q9WVJ9 443 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Cep290Q6A078 2472 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Gprin2D3Z1D7 455 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Ankrd66J3QNN4 192 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Smim19Q80ZU4 107 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Slc16a4Q8R0M8 500 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Rbmxl2Q9DAE2 385 aaKnown RBP12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Adcyap1O70176 175 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Gm614Q3V2K1 191 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Pmis2Q497Q9 96 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Spred3Q6P6N5 408 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Sox21Q811W0 276 aa12.56□□□□□ -0.4
Pcdh20-201ENSMUST00000061628 Csf2rb2P26954 878 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms