RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Q8BTC1 67 aa8.7□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tmem230Q8CIB6 120 aa8.7□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ntn3Q9R1A3 580 aa8.7□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trdv2-1A0A0G2JGB9 116 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 P01654 111 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 P01656 111 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 P03977 111 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trdv2-2Q5R1A4 116 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 GfralQ6SJE0 393 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Bpifa5Q9CQX3 270 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trem3Q9JKE1 183 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm12886B1AZM5 119 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tmem171Q4KL18 322 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr1178Q7TR20 323 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Klk14Q8CGR5 250 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Cd200r1Q9ES57 326 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 MyadmO35682 320 aaKnown RBP8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ren2P00796 401 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Fgf5P15656 264 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ly6dP35459 127 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Klk1b24Q61754 263 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 MiaQ61865 130 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Sulf2Q8CFG0 875 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Lamtor2Q9JHS3 125 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm20403G3UYB0 123 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 RaxO35602 342 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Khdc1aQ3UWR2 166 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ascl3Q9JJR7 174 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tmub1Q9JMG3 245 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Vmn1r61W4VSP5 300 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Dicer1Q8R418 1916 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Urb1Q571H0 2274 aaKnown RBP8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Marf1Q8BJ34 1730 aaKnown RBP8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm9772F6XPD8 135 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Sfxn3Q91V61 321 aa8.69□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Efnb1P52795 345 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 AsipQ03288 131 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm10842Q3U587 122 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm9881Q8BR56 211 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 9930021J03RikH3BKP8 2027 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 A630073D07RikE9PWS6 100 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 HhexP43120 271 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Defb28Q3V2L0 89 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Slc25a35Q5SWT3 300 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Prdx2Q61171 198 aaKnown RBP8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Scnm1Q8K136 229 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tcrg-C2A0A075B5Z2 167 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr92L7N475 312 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Alox12bO70582 701 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 P01853 167 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ndufb8Q9D6J5 186 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm20458E9PXJ7 78 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Prr22F6TNE3 422 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Col11a2Q64739 1736 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm21775J3KMK6 180 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tnfsf11O35235 316 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Myf5P24699 255 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ifi27Q8C6G0 260 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Pxt1Q8K459 51 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Spcs1Q9D958 161 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Vmn1r63Q9EPT1 300 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Prss22Q9ER10 306 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ighv1-42A0A0A6YY38 117 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Foxi3E0CZH3 425 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ceacam10Q61400 265 aa8.68□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ins1P01325 108 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Klk1b22P15948 259 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 SeboxP70368 190 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Bsph1Q3UW26 133 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 ChodlQ9CXM0 273 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Sumo3Q9Z172 110 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trav7-4A0A075B6C1 113 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm45623A0A1B0GSF6 103 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr1016A2ASV2 309 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Q0VG49 157 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 H2-DMb2Q31099 261 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trav7d-4Q5R1H9 113 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Saxo2Q8BQB6 394 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 RpeQ8VEE0 228 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Igkv1-133A0A0B4J1H8 120 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Rpl8P62918 257 aaKnown RBP8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Mogat1Q91ZV4 335 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Plppr1Q8BFZ2 325 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr1183Q8VFF8 303 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Prr23a3Q9CWP9 254 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Sec11aQ9R0P6 179 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 CcsQ9WU84 274 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm45861A0A1B0GRY3 1923 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trav12d-1A0N8R0 115 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tbr1Q64336 681 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Fam222bQ6P539 562 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Alkbh6Q8K2U2 238 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Syngr3Q8R191 229 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr1441Q8VFV3 318 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gpa33Q9JKA5 319 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 SktA2AQ25 1946 aaKnown RBP8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm21616B6ZB74 166 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr1185-ps1F6XP16 303 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Mmp23O88676 391 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Atp6v0cP63082 155 aa8.67□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms