RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Pbp2Q8VIN1 187 aa15.22■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Rnaseh2cQ9CQ18 166 aa15.22■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Atp6v1fQ9D1K2 119 aa15.22■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Tmem126bQ9D1R1 230 aa15.22■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 2200002J24RikQ9D807 110 aa15.22■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Cd200r1Q9ES57 326 aa15.22■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gm20773A0A0A6YXW2 232 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gm20807A0A0A6YXX7 232 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gm20873J3QMQ9 232 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gm20795J3QP49 232 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gm21310J3QQ23 232 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Cst7O89098 144 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gabra2P26048 451 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Cd81P35762 236 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Gm21440Q3TTD8 232 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Zfp872Q3UVL3 465 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Slc25a31Q3V132 320 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 PtafrQ62035 341 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Psg22Q810J1 475 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Klre1Q8CJC7 226 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Ms4a6bQ99N09 244 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 4931428L18RikQ9D4S9 127 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Cst10Q9JM84 148 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Shank1D3YZU1 2167 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 DscamQ9ERC8 2013 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Agr2O88312 175 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Wdr83osQ6ZWX0 106 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Pitpnc1Q8K4R4 332 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Rab11fip5Q8R361 645 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Derl1Q99J56 251 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Fbxo25Q9D2Y6 357 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Vmn1r171Q9EPS6 316 aa15.21■□□□□ 0.03
Ccdc3-201ENSMUST00000027988 Ighv7-2A0A0A6YX91 119 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 P01796 113 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 P01797 113 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 P01799 113 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Spred3Q6P6N5 408 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 P01788 123 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gpr12P35412 334 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Wfdc9Q3UW41 83 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 HrasQ61411 189 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr924Q7TRB8 308 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Tmem70Q921N7 253 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Mrps11Q9DCA2 191 aaKnown RBP15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 AcacaQ5SWU9 2345 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Dpagt1P42867 410 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gfod1Q3UHD2 390 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Tmem40Q4FJU9 225 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Msrb3Q8BU85 253 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Slc24a4Q8CGQ8 622 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Klk13Q8CGR6 276 aa15.2■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Smg1Q8BKX6 3658 aaKnown RBP15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 TncQ80YX1 2110 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Ighv5-17A0A075B5R1 117 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 H3f3cP02301 136 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 G430049J08RikQ3TL09 166 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Fam78bQ8BQN5 261 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr736Q8VFT6 312 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr715Q8VG49 315 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Mpv17lQ99MS3 194 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Ighv6-3A0A075B5T2 118 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Trbv13-3A0A0B4J1H2 113 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Wt1P22561 449 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr968Q8VFN4 314 aa15.19■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Ren1P06281 402 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gm10803Q3TZS6 135 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Trp53rkaQ5U452 244 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Znf474Q6V5K9 347 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Ovch2Q7M761 609 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr335-psQ7TRY6 312 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr1269Q8VEZ2 309 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr1228Q8VGM9 323 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Pth2Q91W27 100 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Tp53rkQ99PW4 244 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Arl13aQ9D416 372 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gm12728V9GX31 77 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gm3045A0A1D5RMA1 209 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gm21834J3QN05 151 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Tnfsf11O35235 316 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 P01674 108 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 St6galnac6Q9JM95 333 aa15.18■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Zfp931A2AHM2 298 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Zfp976E9Q981 636 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Rdh16O54909 317 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 MidnQ3TPJ7 465 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Taar4Q5QD15 347 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Adora3Q61618 319 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr25Q7TRD6 313 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr509Q8VF20 321 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Frrs1lB1AXV0 293 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gm5239D3YYZ2 122 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Ly6c1P0CW02 131 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Harbi1Q8BR93 349 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Olfr1184Q8VG86 311 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Tsc22d4Q9EQN3 387 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Opn3Q9WUK7 400 aa15.17■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Ighv9-2A0A0B4J1J4 117 aa15.16■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Fndc10A2A9Q0 223 aa15.16■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Gm12169F2Z474 250 aa15.16■□□□□ 0.02
Ccdc3-201ENSMUST00000027988 Atp5g2P56383 146 aa15.16■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms